RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ALOX12P18054 663 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 GABRG2P18507 467 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PRPS1L1P21108 318 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 SOAT1P35610 550 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 EIF2DP41214 584 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 SLC19A1P41440 591 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 OR1E2P47887 323 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CLK1P49759 484 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CLK3P49761 638 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 KCNC4Q03721 635 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ENPP2Q13822 863 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 HIST2H2ACQ16777 129 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 GGTA1PQ4G0N0 100 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 RUNDC3AQ59EK9 446 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 RBM48Q5RL73 367 aaKnown RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 HIST2H2AA3Q6FI13 130 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PLEKHG7Q6ZR37 379 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 GATAD2AQ86YP4 633 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ZDHHC21Q8IVQ6 265 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 TMEFF1Q8IYR6 380 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 NAGSQ8N159 534 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 CELF2-AS1Q8N7Q2 184 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 ATG16L2Q8NAA4 619 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 OR52J3Q8NH60 311 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 MCFD2Q8NI22 146 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 STARD8Q92502 1023 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DMRTB1Q96MA1 342 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 KCNC2Q96PR1 638 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 SGPP1Q9BX95 441 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 BTBD1Q9H0C5 482 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 RERGLQ9H628 205 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 EPHX3Q9H6B9 360 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 DMRT3Q9NQL9 472 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PDP1Q9P0J1 537 aaPredicted RBP7.25□□□□□ -1.25
TRIM55-202ENST00000315962 GMPPBQ9Y5P6 360 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 PCM1Q15154 2024 aa7.25□□□□□ -1.25
TRIM55-202ENST00000315962 A0A1W2PPV9 198 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SMIM30A4D0T7 59 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CACNB4O00305 520 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PLPP1O14494 284 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 AP3D1O14617 1153 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KLHL18O94889 574 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CHRM5P08912 532 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ETFAP13804 333 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 POU2F1P14859 743 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KELP23276 732 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SERPINB1P30740 379 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GRK5P34947 590 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KRT20P35900 424 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 LIPAP38571 399 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TNFRSF4P43489 277 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 DAPP51397 102 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 HSPB3Q12988 150 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 MPEG1Q2M385 716 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CDKL4Q5MAI5 379 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ATAD3BQ5T9A4 648 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF691Q5VV52 312 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 UBE2UQ5VVX9 321 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 MTSS1LQ765P7 747 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF765Q7L2R6 523 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF438Q7Z4V0 828 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CCDC71Q8IV32 467 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 RASGRP3Q8IV61 690 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 OR4A15Q8NGL6 344 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CHTF18Q8WVB6 975 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 EXOSC8Q96B26 276 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 ZHX1-C8orf76Q96EF9 292 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 Q96MT0 163 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 BTBD2Q9BX70 525 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GPR174Q9BXC1 333 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 UGT2B28Q9BY64 529 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TPT1P8Q9HAU6 139 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 MIEF1Q9NQG6 463 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 AASDHPPTQ9NRN7 309 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KIF17Q9P2E2 1029 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 C3orf18Q9UK00 162 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SLC6A14Q9UN76 642 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SPTBP11277 2137 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SHISA7A6NL88 538 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 BTN3A3O00478 584 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SOX1O00570 391 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PI15O43692 258 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 SCN2BO60939 215 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 KCNK2O95069 426 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 PRPS2P11908 318 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 IDSP22304 550 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 AZGP1P25311 298 aaKnown RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 VLDLRP98155 873 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 STEAP3Q658P3 488 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 Q6ZSR6 202 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 NLGN4XQ8N0W4 816 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GLB1L3Q8NCI6 653 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 TSPEARQ8WU66 669 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 LGALS12Q96DT0 336 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 LINC00615Q96LM1 132 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 CAMK1GQ96NX5 476 aa7.24□□□□□ -1.25
TRIM55-202ENST00000315962 GAS2L1Q99501 681 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-202ENST00000315962 RBM4BQ9BQ04 359 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms