RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR3A2P47893 321 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ABRAXAS2Q15018 415 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 FAM214AQ32MH5 1076 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ALFQ53S48 1182 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 FAM171BQ6P995 826 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 METTL21AQ8WXB1 218 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 HSPA12BQ96MM6 686 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MYOCQ99972 504 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 FGFBP2Q9BYJ0 223 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SMPD4Q9NXE4 827 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 GTF2A1LQ9UNN4 478 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 DGKBQ9Y6T7 804 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 L7N2F9 121 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TGOLN2O43493 480 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 RNF13O43567 381 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 NPR2P20594 1047 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MTNR1AP48039 350 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SEPHS1P49903 392 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PPP1R3AQ16821 1122 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF765Q7L2R6 523 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 S100A7AQ86SG5 101 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZBED3Q96IU2 234 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PADI3Q9ULW8 664 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ADAMTS5Q9UNA0 930 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PLXNA3P51805 1871 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 FUOMA2VDF0 154 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ITGB1P05556 798 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 HTR1AP08908 422 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PTPN2P17706 415 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SNRPGP62308 76 aaKnown RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 RELAQ04206 551 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 LASP1Q14847 261 aaKnown RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 HDDC3Q8N4P3 179 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SLC37A3Q8NCC5 494 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 XAGE5Q8WWM1 108 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CWH43Q9H720 699 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TREX1Q9NSU2 369 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MT-CO1P00395 513 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 DBIP07108 87 aaKnown RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TBPP20226 339 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 IL12BP29460 328 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 C3orf38Q5JPI3 329 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 SYT6Q5T7P8 510 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PAQR7Q86WK9 346 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 GPR156Q8NFN8 814 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 OR2T11Q8NH01 316 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CNN2Q99439 309 aaKnown RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PINK1Q9BXM7 581 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF436Q9C0F3 470 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 GABARAPL1Q9H0R8 117 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZCCHC3Q9NUD5 404 aaKnown RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 ZFP37Q9Y6Q3 630 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 A0A0D9SG52 128 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 RGS11O94810 467 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 CD6P30203 668 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TAP2Q03519 686 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 EN1Q05925 392 aaPredicted RBP8.47□□□□□ -1.05
COL6A5-202ENST00000312481 MZT1Q08AG7 82 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 RFPL4BQ6ZWI9 263 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TANKQ92844 425 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 KLHL9Q9P2J3 617 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 PLCL2Q9UPR0 1127 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 DOCK11Q5JSL3 2073 aa8.47□□□□□ -1.05
COL6A5-202ENST00000312481 TBC1D3KA0A087X1G2 549 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 LRP5LA4QPB2 252 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 TBC1D3FA6NER0 549 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF208O43345 1280 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 EMC8O43402 210 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 NUDT14O95848 222 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 MTHFD1P11586 935 aaKnown RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PKLRP30613 574 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 CLCNKBP51801 687 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 DLX5P56178 289 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PDSS1Q5T2R2 415 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 TBC1D3GQ6DHY5 549 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 CD300LGQ6UXG3 332 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF704Q6ZNC4 412 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 COG8Q96MW5 612 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 SLC22A11Q9NSA0 550 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 SLCO3A1Q9UIG8 710 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 HS3ST4Q9Y661 456 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 C2orf71A6NGG8 1288 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 G3V2L1 256 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 H3BMQ9 156 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 M0QZQ0 153 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 KCNK5O95279 499 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 AKT2P31751 481 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 MTPNP58546 118 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 CYP4F2P78329 520 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PSRC1Q6PGN9 363 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 TRIB2Q92519 343 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 ARL11Q969Q4 196 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 FBXL8Q96CD0 374 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 UHRF1Q96T88 793 aaPredicted RBP8.46□□□□□ -1.05
COL6A5-202ENST00000312481 PSD2Q9BQI7 771 aa8.46□□□□□ -1.05
COL6A5-202ENST00000312481 URM1Q9BTM9 101 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms