RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PHF11Q9UIL8 331 aa15.83■□□□□ 0.12
CLCF1-201ENST00000312438 CSNK1G3Q9Y6M4 447 aa15.83■□□□□ 0.12
CLCF1-201ENST00000312438 HEATR5BQ9P2D3 2071 aa15.83■□□□□ 0.12
CLCF1-201ENST00000312438 A0A1B0GTW7 788 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 MYO1GB0I1T2 1018 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 PRKRAO75569 313 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ERAL1O75616 437 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 PRSS23O95084 383 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 GNSP15586 552 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 BUD31P41223 144 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CCT3P49368 545 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 NCBP2P52298 156 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CASP9P55211 416 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ZNF630Q2M218 657 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SPDYE7PQ495Y7 208 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 LYSMD4Q5XG99 296 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 TMEM214Q6NUQ4 689 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 DGLUCYQ7Z3D6 616 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 C6orf120Q7Z4R8 191 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SPRED1Q7Z699 444 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CSNK1A1LQ8N752 337 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 C19orf47Q8N9M1 422 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ZCCHC10Q8TBK6 192 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 NR1H4Q96RI1 486 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CCDC3Q9BQI4 270 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 IL21RQ9HBE5 538 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 GIMAP4Q9NUV9 329 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 KCMF1Q9P0J7 381 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 DNAJB9Q9UBS3 223 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 OAZ3Q9UMX2 235 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ENTPD4Q9Y227 616 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SNX11Q9Y5W9 270 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 FANCMQ8IYD8 2048 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 RHPN2P1A8MT19 583 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SOCS2O14508 198 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ACOX3O15254 700 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SH3BP5O60239 455 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ZNF682O95780 498 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CST1P01037 141 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CSNK2A2P19784 350 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CPN2P22792 545 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 TLX1P31314 330 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 MPIP34949 423 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 GPC1P35052 558 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CDK9P50750 372 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 C11orf74Q86VG3 221 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 CBR4Q8N4T8 237 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 TCTN2Q96GX1 697 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 VPS50Q96JG6 964 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 NTN4Q9HB63 628 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 FAM60AQ9NP50 221 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 PRDM9Q9NQV7 894 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 PRMT8Q9NR22 394 aaPredicted RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 DNAAF2Q9NVR5 837 aaKnown RBP15.82■□□□□ 0.12
CLCF1-201ENST00000312438 DAPP1Q9UN19 280 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 SLC22A7Q9Y694 548 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 ZNF780BQ9Y6R6 833 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 PLXND1Q9Y4D7 1925 aa15.82■□□□□ 0.12
CLCF1-201ENST00000312438 C7orf72A4D263 438 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SLC9B1P1A6NJY1 282 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 TXNDC9O14530 226 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 LAMTOR5O43504 91 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SRPX2O60687 465 aaPredicted RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 NR2F6P10588 404 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CTSKP43235 329 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 DHPSP49366 369 aaPredicted RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 EPHA4P54764 986 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 VSX2P58304 361 aaPredicted RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CDK6Q00534 326 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 RUNX2Q13950 521 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SCARB2Q14108 478 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SPIDRQ14159 915 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CEBPEQ15744 281 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 EPHX4Q8IUS5 362 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 MCATQ8IVS2 390 aaKnown RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SLC30A8Q8IWU4 369 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CCDC116Q8IYX3 515 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CNRIP1Q96F85 164 aaPredicted RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 MAP3K3Q99759 626 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 ASPSCR1Q9BZE9 553 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 RAB33BQ9H082 229 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 LYRM4Q9HD34 91 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 SEMA3GQ9NS98 782 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 ADPRHL2Q9NX46 363 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 ZNF639Q9UID6 485 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 AK5Q9Y6K8 562 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 CROCCQ5TZA2 2017 aa15.81■□□□□ 0.12
CLCF1-201ENST00000312438 ARHGEF17Q96PE2 2063 aaPredicted RBP15.81■□□□□ 0.12
CLCF1-201ENST00000312438 PDLIM1O00151 329 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 RASAL1O95294 804 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 TDGF1P13385 188 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 MAGEA2P43356 314 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 LIM2P55344 173 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 DSTNP60981 165 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 SNRPNP63162 240 aaKnown RBP15.8■□□□□ 0.12
CLCF1-201ENST00000312438 TNFRSF17Q02223 184 aa15.8■□□□□ 0.12
CLCF1-201ENST00000312438 EEF1A2Q05639 463 aaKnown RBP15.8■□□□□ 0.12
CLCF1-201ENST00000312438 ELOAQ14241 798 aaKnown RBP15.8■□□□□ 0.12
CLCF1-201ENST00000312438 C6orf132Q5T0Z8 1188 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms