RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 HGSNATQ68CP4 663 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 RNF130Q86XS8 419 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 CELF5Q8N6W0 485 aaKnown RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 OR4K14Q8NGD5 310 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TPT1P8Q9HAU6 139 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 A8MVJ9 347 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 UPK3BL1B0FP48 263 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 UPK3BL2E5RIL1 263 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 SULT1C2O00338 296 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ETFAP13804 333 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 MAP2K3P46734 347 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 HSD17B7P56937 341 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 RSU1Q15404 277 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF423Q2M1K9 1284 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ELMOD2Q8IZ81 293 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 KIAA1191Q96A73 305 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 DDX4Q9NQI0 724 aaKnown RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 CPQQ9Y646 472 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 OR2B3O76000 313 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 CCNOP22674 350 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ARL2P36404 184 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 RIDAP52758 137 aaKnown RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 GNG13Q9P2W3 67 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 UBE2J1Q9Y385 318 aaPredicted RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 HAS3O00219 553 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 NARSO43776 548 aaKnown RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 TBX10O75333 385 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 DAOAP59103 153 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 NTRK2Q16620 822 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 UNC5DQ6UXZ4 953 aa14.91□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF578Q96N58 590 aaPredicted RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 GLIS2Q9BZE0 524 aaPredicted RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 GPN2Q9H9Y4 310 aaPredicted RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 SRA1Q9HD15 236 aaKnown RBP14.91□□□□□ -0.02
HCFC1-201ENST00000310441 B4GALT5O43286 388 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 RAB4BP61018 213 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 RTL6Q6ICC9 239 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 GPR149Q86SP6 731 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ARL6Q9H0F7 186 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 PCDHAC1Q9H158 963 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 PADI3Q9ULW8 664 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 DNAJC13O75165 2243 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 VILLO15195 856 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 GABBR2O75899 941 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 PAHP00439 452 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ART1P52961 327 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 DTLQ9NZJ0 730 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 BCL9O00512 1426 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 MYOM1P52179 1685 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 A0A1B0GVT2 93 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 OTOL1A6NHN0 477 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ANKRD28O15084 1053 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 GSK3BP49841 420 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 RAB11BQ15907 218 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF783Q6ZMS7 281 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ARNTL2Q8WYA1 636 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 CHFRQ96EP1 664 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 CENPOQ9BU64 300 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 NUDT7P0C024 238 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 PBX1P40424 430 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 POU6F2P78424 691 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SLC18B1Q6NT16 456 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SLC39A4Q6P5W5 647 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 DNAJC22Q8N4W6 341 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 DOHHQ9BU89 302 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 EXTL2Q9UBQ6 330 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ABCC6O95255 1503 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 FHP07954 510 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 GPX6P59796 221 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 TMEM35AQ53FP2 167 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 OR9A1PQ8NGU1 263 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 GCDHQ92947 438 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ARMC5Q96C12 935 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SSX3Q99909 188 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SOX1O00570 391 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 EEF1E1O43324 174 aaKnown RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 KCNJ13O60928 360 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ERVK-16P61578 105 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 FAM43BQ6ZT52 329 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 BTBD2Q9BX70 525 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 MAFBQ9Y5Q3 323 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 BRINP1O60477 761 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ALPIP09923 528 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 ZBTB48P10074 688 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 KLF1Q13351 362 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SF3B4Q15427 424 aaKnown RBP eCLIP14.9□□□□□ -0.023e-8■■■■■ 45.8
HCFC1-201ENST00000310441 KIAA0907Q7Z7F0 614 aaPredicted RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 CILP2Q8IUL8 1156 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 PHTF2Q8N3S3 785 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 C1orf52Q8N6N3 182 aaKnown RBP14.9□□□□□ -0.02
HCFC1-201ENST00000310441 AUTS2Q8WXX7 1259 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 EBF2Q9HAK2 575 aa14.9□□□□□ -0.02
HCFC1-201ENST00000310441 SPATA31D3P0C874 917 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 RAB5CP51148 216 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 NIPAL3Q6P499 406 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SPATA31D4Q6ZUB0 917 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 SMIM15Q7Z3B0 74 aa14.89□□□□□ -0.03
HCFC1-201ENST00000310441 LILRB2Q8N423 598 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms