RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SEC14L3Q9UDX4 400 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 DYRK1BQ9Y463 629 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 KCNE2Q9Y6J6 123 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 LRRC37A2A6NM11 1700 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PRPS2P11908 318 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 CD72P21854 359 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PRKACBP22694 351 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PSMB5P28074 263 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SPINT3P49223 89 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SCARB2Q14108 478 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SHQ1Q6PI26 577 aaKnown RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 C11orf88Q6PI97 169 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF852Q6ZMS4 543 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 RFPL4BQ6ZWI9 263 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 B3GNT7Q8NFL0 401 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 BTN2A2Q8WVV5 523 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 DEDD2Q8WXF8 326 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SLC35A5Q9BS91 424 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 OARD1Q9Y530 152 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 RFXAPO00287 272 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ICMTO60725 284 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 C1SP09871 688 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 TGM1P22735 817 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 RGS6P49758 472 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 TAS2R50P59544 299 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 POLR2LP62875 67 aaKnown RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ACVR1Q04771 509 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SLC14A2Q15849 920 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ARHGAP15Q53QZ3 475 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 COQ5Q5HYK3 327 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 DCST1Q5T197 706 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ERICH5Q6P6B1 374 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 HDDC2Q7Z4H3 204 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 WDR53Q7Z5U6 358 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 NAGSQ8N159 534 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SLC39A11Q8N1S5 342 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 DYNC2LI1Q8TCX1 351 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 ADAMTS19Q8TE59 1207 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SCRN2Q96FV2 425 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 SAMD11Q96NU1 681 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 FNDC11Q9BVV2 318 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 PPIL3Q9H2H8 161 aaKnown RBP12.12□□□□□ -0.47
RETREG3-201ENST00000309428 FZD3Q9NPG1 666 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 FNIP2Q9P278 1114 aa12.12□□□□□ -0.47
RETREG3-201ENST00000309428 A0A1W2PPK0 400 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 CLCA1A8K7I4 914 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 H3BSH0 61 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 TLR4O00206 839 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SLC31A1O15431 190 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 PCDH7O60245 1069 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ETHE1O95571 254 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ITGA2P17301 1181 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 PIK3CBP42338 1070 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SLC6A11P48066 632 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 PROX2Q3B8N5 592 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ATAT1Q5SQI0 421 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 TUBA3EQ6PEY2 450 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
RETREG3-201ENST00000309428 IZUMO1Q8IYV9 350 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 GGHQ92820 318 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 NEIL2Q969S2 332 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 STOX2Q9P2F5 926 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-201ENST00000309428 GPR52Q9Y2T5 361 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SLC30A4O14863 429 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SMAD9O15198 467 aaKnown RBP12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ANXA8P13928 327 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 JUNBP17275 347 aaPredicted RBP12.11□□□□□ -0.47
RETREG3-201ENST00000309428 CELP19835 753 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 CPN2P22792 545 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 SLC35A2P78381 396 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ARTNQ5T4W7 220 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 RNF130Q86XS8 419 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 HUS1BQ8NHY5 278 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 IRF7Q92985 503 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 FCRL4Q96PJ5 515 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
RETREG3-201ENST00000309428 P2RY12Q9H244 342 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 KCNH6Q9H252 994 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 KCNK6Q9Y257 313 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 OR1A2Q9Y585 309 aa12.11□□□□□ -0.47
RETREG3-201ENST00000309428 PRPS1L1P21108 318 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 FGFBP1Q14512 234 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 ARHGEF6Q15052 776 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 SPHARQ15513 63 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 AKIRIN2Q53H80 203 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 XKR7Q5GH72 579 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 ATP6V1C2Q8NEY4 427 aa12.1□□□□□ -0.47
RETREG3-201ENST00000309428 CLP1Q92989 425 aaKnown RBP12.1□□□□□ -0.47
RETREG3-201ENST00000309428 LOC102723532A0A0G2JNH3 316 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms