RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CYB561P49447 251 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 NEK2P51955 445 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ID2Q02363 134 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 OC90Q02509 493 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 RCN2Q14257 317 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ZRSR2Q15696 482 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 TSNAXIP1Q2TAA8 658 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 AP5B1Q2VPB7 878 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 C1QL3Q5VWW1 255 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 C18orf63Q68DL7 685 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ADGRD1Q6QNK2 874 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 GFRALQ6UXV0 394 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 TIFABQ6ZNK6 161 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 DGAT2L6Q6ZPD8 337 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 RPS27LQ71UM5 84 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 TMEM178AQ8NBL3 297 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 MZB1Q8WU39 189 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 C1QTNF3Q9BXJ4 246 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ZNF225Q9UK10 706 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 FBXW2Q9UKT8 454 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ASB4Q9Y574 426 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 ANGPTL3Q9Y5C1 460 aa18.44■□□□□ 0.54
PDZRN3-202ENST00000308537 DNAJC13O75165 2243 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 WASHC1A8K0Z3 465 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 FOXE1O00358 373 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 ITGA10O75578 1167 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 MYBL2P10244 700 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 COL8A1P27658 744 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 SLAMF1Q13291 335 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 CUL3Q13618 768 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 MAMDC2Q7Z304 686 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 MDGA2Q7Z553 956 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 MYLK4Q86YV6 388 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 OR4N5Q8IXE1 308 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 TMEM132CQ8N3T6 1108 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 CPSF7Q8N684 471 aaKnown RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 RGMAQ96B86 450 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 GPR137Q96N19 417 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 MRPL57Q9BQC6 102 aaKnown RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 DDX31Q9H8H2 851 aaKnown RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 LIN28AQ9H9Z2 209 aaKnown RBP18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 SEC14L3Q9UDX4 400 aa18.43■□□□□ 0.54
PDZRN3-202ENST00000308537 EXOC1LA0A1B0GW35 172 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 SYNDIG1LA6NDD5 238 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 A8MT66 165 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 PROM1O43490 865 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 CLDN9O95484 217 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 IGKV3-11P04433 115 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 SNRPAP09012 282 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 CPN2P22792 545 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 PTX3P26022 381 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 TNFRSF17Q02223 184 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 GGTA1PQ4G0N0 100 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 TRMT10CQ7L0Y3 403 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 MORN4Q8NDC4 146 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 OR14A16Q8NHC5 309 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 SLC2A12Q8TD20 617 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 ZNF721Q8TF20 911 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 ZNF483Q8TF39 744 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 UCN3Q969E3 161 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 TSPAN10Q9H1Z9 355 aaPredicted RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 MRPL46Q9H2W6 279 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 ZNF835Q9Y2P0 537 aa18.42■□□□□ 0.54
PDZRN3-202ENST00000308537 A0A1W2PR48 441 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 ZG16O60844 167 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 ZFAND5O76080 213 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 RHOXF2BP0C7M4 288 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 CA7P43166 264 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 STT3AP46977 705 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 HK2P52789 917 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 STX4Q12846 297 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 SERTAD2Q14140 314 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 MAPKAPK3Q16644 382 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 TAOK1Q7L7X3 1001 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 FGD2Q7Z6J4 655 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 GPR180Q86V85 440 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 FJX1Q86VR8 437 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 IFT20Q8IY31 132 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 GSPT2Q8IYD1 628 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 HORMAD2Q8N7B1 307 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 DAZLQ92904 295 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 RHOXF2Q9BQY4 288 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 RPF2Q9H7B2 306 aaKnown RBP18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 TMEM216Q9P0N5 145 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 MYOTQ9UBF9 498 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 TMCO1Q9UM00 188 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 IKBKGQ9Y6K9 419 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 CLCA3PQ9Y6N3 262 aa18.41■□□□□ 0.54
PDZRN3-202ENST00000308537 CACNA1CQ13936 2221 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 C17orf105B2RV13 164 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 HRKO00198 91 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 FCHO1O14526 889 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 OR2J2O76002 312 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 SEMA3DO95025 777 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 IFNA16P05015 189 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 FOLH1Q04609 750 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 SLC29A2Q14542 456 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 FRG2Q64ET8 278 aa18.4■□□□□ 0.54
PDZRN3-202ENST00000308537 LETMD1Q6P1Q0 360 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms