RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TANKQ92844 425 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ARL8AQ96BM9 186 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ABHD17AQ96GS6 310 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 THOC3Q96J01 351 aaKnown RBP10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 FAIM2Q9BWQ8 316 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SLC25A18Q9H1K4 315 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ADAP2Q9NPF8 381 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PFDN4Q9NQP4 134 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NECTIN3Q9NQS3 549 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PNO1Q9NRX1 252 aaKnown RBP10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 KCMF1Q9P0J7 381 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MCM8Q9UJA3 840 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TP53TG5Q9Y2B4 290 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF451Q9Y4E5 1061 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TRAF6Q9Y4K3 522 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PCDHGB7Q9Y5F8 929 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 EPG5Q9HCE0 2579 aa10.32□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 IGKV3D-11A0A0A0MRZ8 115 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MASP2O00187 686 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PROM1O43490 865 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CTNSO60931 367 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SKAP2O75563 359 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 AIFM1O95831 613 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SERPINA7P05543 415 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PRR35P0CG20 571 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CHN1P15882 459 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TNNI3P19429 210 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TIA1P31483 386 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GSTM5P46439 218 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SLC1A6P48664 564 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TAS2R50P59544 299 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PLIN5Q00G26 463 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 BIKQ13323 160 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MPP2Q14168 576 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ELAVL1Q15717 326 aaKnown RBP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NDUFAF5Q5TEU4 345 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C6orf163Q5TEZ5 329 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 AGAP7PQ5VUJ5 663 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ATG16L1Q676U5 607 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C18orf63Q68DL7 685 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PLAG1Q6DJT9 500 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TCTN3Q6NUS6 607 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RNF165Q6ZSG1 346 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 EXD3Q8N9H8 876 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 RAB3IL1Q8TBN0 382 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CHTF18Q8WVB6 975 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DYDC1Q8WWB3 177 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 APIPQ96GX9 242 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 AGAP4Q96P64 663 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DGAT2Q96PD7 388 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SH3GL2Q99962 352 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 MESP1Q9BRJ9 268 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PELOQ9BRX2 385 aaKnown RBP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 EBPLQ9BY08 206 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ALOXE3Q9BYJ1 711 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ILKAPQ9H0C8 392 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 EPS8L2Q9H6S3 715 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 KCNK13Q9HB14 408 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TNFRSF12AQ9NP84 129 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TEX10Q9NXF1 929 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ATG4BQ9Y4P1 393 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ASB4Q9Y574 426 aa10.31□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 C1orf226A1L170 272 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 A8MUA0 341 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TMEM233B4DJY2 109 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PIP5K1BO14986 540 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 FGF17O60258 216 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 OR10H2O60403 315 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SEC22BO75396 215 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PRKRAO75569 313 aaKnown RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LYPLA1O75608 230 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CEACAM4O75871 244 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 FGF4P08620 206 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LINC00032P0C843 101 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PIK3R1P27986 724 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ALDH9A1P49189 494 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SOX8P57073 446 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 SLC26A5P58743 744 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ID2Q02363 134 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 FOLH1Q04609 750 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ZNF763Q0D2J5 394 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 HEPACAMQ14CZ8 416 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TERF2Q15554 542 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 GALNTL6Q49A17 601 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 PCSK4Q6UW60 755 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 ASB18Q6ZVZ8 466 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 TMEM132CQ8N3T6 1108 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 OR6Y1Q8NGX8 325 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 OR14A16Q8NHC5 309 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CDC26Q8NHZ8 85 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 M1APQ8TC57 530 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 BRIX1Q8TDN6 353 aaKnown RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 DAZLQ92904 295 aaKnown RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 METTL2AQ96IZ6 378 aaKnown RBP10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 CCT7Q99832 543 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 NUDT9Q9BW91 350 aa10.3□□□□□ -0.76
CSPG4P1Y-201ENST00000306641 LRTM1Q9HBL6 345 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms