RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 A6NIN4 97 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 GRXCR1A8MXD5 290 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PRR23D1E9PI22 279 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 M0R3H8 397 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 SCAMP2O15127 329 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 PTHP01270 115 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 FGBP02675 491 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PRR23D2P0DMB1 279 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 MYOGP15173 224 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 VIPR1P32241 457 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 BLVRAP53004 296 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PCDH1Q08174 1060 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 OXA1LQ15070 435 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PROX2Q3B8N5 592 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PSRC1Q6PGN9 363 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 PLEKHM3Q6ZWE6 761 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 AMZ2Q86W34 360 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 MMP21Q8N119 569 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 KLHL6Q8WZ60 621 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 FCGR1BQ92637 280 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ZNF486Q96H40 463 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 SLC38A2Q96QD8 506 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 UCK2Q9BZX2 261 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 MMP27Q9H306 513 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 KMOO15229 486 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ERI3O43414 337 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 TPPPO94811 219 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PTPN2P17706 415 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 RPL3P39023 403 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 CCT3P49368 545 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 SCN1BQ07699 218 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 COX10Q12887 443 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 SELENBP1Q13228 472 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 C12orf76Q8N812 135 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 OR5D16Q8NGK9 328 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 SLC5A11Q8WWX8 675 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 OR5M11Q96RB7 305 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 NECTIN3Q9NQS3 549 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 CDH7Q9ULB5 785 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 CLCA1A8K7I4 914 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 PI15O43692 258 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ICMTO60725 284 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 CPNE3O75131 537 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 SAGP10523 405 aaPredicted RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 HMGA1P17096 107 aaKnown RBP13.43□□□□□ -0.26
SDC2-201ENST00000302190 MTAPQ13126 283 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 FAM26DQ5JW98 314 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ATAT1Q5SQI0 421 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 OXR1Q8N573 874 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ZNF671Q8TAW3 534 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ZFP3Q96NJ6 502 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 EFCAB11Q9BUY7 163 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 IRF2BPLQ9H1B7 796 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 P2RY12Q9H244 342 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 ADAP2Q9NPF8 381 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 STMN3Q9NZ72 180 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 B3GNT3Q9Y2A9 372 aa13.43□□□□□ -0.26
SDC2-201ENST00000302190 TGM5O43548 720 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 CELP19835 753 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 CAV3P56539 151 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 GABARAPL2P60520 117 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MAP4K2Q12851 820 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 GINS1Q14691 196 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 PTGES3Q15185 160 aaKnown RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SIGIRRQ6IA17 410 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ZNF517Q6ZMY9 492 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 PARGQ86W56 976 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 RIMKLAQ8IXN7 391 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ADAMTS15Q8TE58 950 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 IRF7Q92985 503 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ZSCAN5AQ9BUG6 496 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 GPN2Q9H9Y4 310 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 UCKL1Q9NWZ5 548 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ANKMY1Q9P2S6 941 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MBD1Q9UIS9 605 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 A0A1W2PPK0 400 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 OR6C70A6NIJ9 312 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 PAK4O96013 591 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 ZNF8P17098 575 aaPredicted RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 CD9P21926 228 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MAPK9P45984 424 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
SDC2-201ENST00000302190 BRAT1Q6PJG6 821 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 B3GLCTQ6Y288 498 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 GRAMD2AQ8IUY3 354 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SLC35G5Q96KT7 338 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 QRFPRQ96P65 431 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 HDHD5Q9BXW7 423 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SLC46A2Q9BY10 475 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MROQ9BYG7 248 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 MMP28Q9H239 520 aa13.42□□□□□ -0.26
SDC2-201ENST00000302190 SP140LQ9H930 580 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms