RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MPPE1Q53F39 396 aa14□□□□□ -0.17
COL6A2-201ENST00000300527 GDPD1Q8N9F7 314 aa14□□□□□ -0.17
COL6A2-201ENST00000300527 REPS1Q96D71 796 aa14□□□□□ -0.17
COL6A2-201ENST00000300527 GPATCH2Q9NW75 528 aa14□□□□□ -0.17
COL6A2-201ENST00000300527 PLEKHB1Q9UF11 243 aaPredicted RBP14□□□□□ -0.17
COL6A2-201ENST00000300527 SLC9A8Q9Y2E8 581 aa14□□□□□ -0.17
COL6A2-201ENST00000300527 DOCK4Q8N1I0 1966 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ZAR1LA6NP61 321 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ORC5O43913 435 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 SYPP08247 313 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 MSL3P1P0C860 447 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 JUPP14923 745 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 SLC9A3P48764 834 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 DBPQ10586 325 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CCSMST1Q4G0I0 132 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 IL20RBQ6UXL0 311 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 RSPO2Q6UXX9 243 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CCDC149Q6ZUS6 474 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 TMEM145Q8NBT3 493 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 OR8J2Q8NGG1 315 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF431Q8TF32 576 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 BRD9Q9H8M2 597 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF624Q9P2J8 865 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 RPL36Q9Y3U8 105 aaKnown RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 MTMR11A4FU01 709 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 OR7A10O76100 309 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 BCHEP06276 602 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 TRAPPC2P0DI81 140 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 TRAPPC2BP0DI82 140 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ATF6P18850 670 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 PKLRP30613 574 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 FGFBP1Q14512 234 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 SEC23BQ15437 767 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 DCST1Q5T197 706 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 THOC6Q86W42 341 aaKnown RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 IQCF2Q8IXL9 164 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 UBTD2Q8WUN7 234 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 FUBP3Q96I24 572 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 LRR1Q96L50 414 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 HTATIP2Q9BUP3 242 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 DPCDQ9BVM2 203 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 B3GAT2Q9NPZ5 323 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 FTSJ1Q9UET6 329 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 MGAT4AQ9UM21 535 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ENPP4Q9Y6X5 453 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 MYO10Q9HD67 2058 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 SH3D21A4FU49 640 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 NPIPB15A6NHN6 443 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 COCHO43405 550 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 TOXO94900 526 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CH25HO95992 272 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 MYCP01106 439 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 C1QBP02746 253 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 OR56A5P0C7T3 313 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 IDSP22304 550 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CPN2P22792 545 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ATP6V1E1P36543 226 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 NSG1P42857 185 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 PREPP48147 710 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 LSM11P83369 360 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 RHAGQ02094 409 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 C19orf57Q0VDD7 668 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 FCN2Q15485 313 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ANXA8L1Q5VT79 327 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 WFDC5Q8TCV5 224 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 PPCDCQ96CD2 204 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 SAMD11Q96NU1 681 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 KATNB1Q9BVA0 655 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ACAT2Q9BWD1 397 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 GLTPQ9NZD2 209 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF282Q9UDV7 671 aaPredicted RBP13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CCDC88CQ9P219 2028 aa13.99□□□□□ -0.17
COL6A2-201ENST00000300527 CD8B2A6NJW9 211 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CDK2AP1O14519 115 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SLC30A4O14863 429 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MPZL2O60487 215 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 IGLV3-27P01718 113 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 NR2F6P10588 404 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CD8BP10966 210 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SOX18P35713 384 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 BDKRB1P46663 353 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 GATMP50440 423 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CLEC12AQ5QGZ9 265 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 ANGPTL6Q8NI99 470 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SPATA9Q9BWV2 254 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MED28Q9H204 178 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 ATP6V1HQ9UI12 483 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 PCDHB7Q9Y5E2 793 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SLC38A8A6NNN8 435 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 XPAP23025 273 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 PPIBP23284 216 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 LIMK1P53667 647 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 RRAS2P62070 204 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 RING1Q06587 406 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CXorf57Q6NSI4 855 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 TRIM40Q6P9F5 258 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 ZNF767PQ75MW2 155 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MRPL10Q7Z7H8 261 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MARCH9Q86YJ5 346 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms