RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
CDH8-201ENST00000299345 OR2A25A4D2G3 310 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 LATO43561 262 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 KAT7O95251 611 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 SERPINB1P30740 379 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 UGT2B15P54855 530 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 WSCD2Q2TBF2 565 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 ADAMTSL4Q6UY14 1074 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.34
CDH8-201ENST00000299345 KBTBD8Q8NFY9 601 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 SLC38A5Q8WUX1 472 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 ASB16Q96NS5 453 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 IL4I1Q96RQ9 567 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 CHCHD6Q9BRQ6 235 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 LGR4Q9BXB1 951 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 IGFLR1Q9H665 355 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 ACER3Q9NUN7 267 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 B3GNT3Q9Y2A9 372 aa12.96□□□□□ -0.34
CDH8-201ENST00000299345 PLXNB3Q9ULL4 1909 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 MPZL2O60487 215 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 RPLP0P05388 317 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 CDK1P06493 297 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 MYOGP15173 224 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 XCR1P46094 333 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 PTGES3Q15185 160 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 ARMCX4Q5H9R4 360 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 VITQ6UXI7 678 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 TEFMQ96QE5 360 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 ABCG4Q9H172 646 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 NMNAT1Q9HAN9 279 aaPredicted RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 ACSL5Q9ULC5 683 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 GPSM3Q9Y4H4 160 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 SCAMP1O15126 338 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 CRISP1P54107 249 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 SMIM11AP58511 58 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 CCDC80Q76M96 950 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 APH1BQ8WW43 257 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 SLC35G5Q96KT7 338 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 TRNAU1APQ9NX07 287 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 PCDHGA2Q9Y5H1 932 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 H1F0P07305 194 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 GADD45AP24522 165 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 TBCEQ15813 527 aaPredicted RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 METRNLQ641Q3 311 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 VN1R5Q7Z5H4 357 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 NLGN4XQ8N0W4 816 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
CDH8-201ENST00000299345 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 UCK2Q9BZX2 261 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 TMEM245Q9H330 911 aa12.95□□□□□ -0.34
CDH8-201ENST00000299345 CLDN24A6NM45 220 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 AXIN1O15169 862 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 SOX14O95416 240 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 LIPAP38571 399 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 TUBA1BP68363 451 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 RUNX3Q13761 415 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 CAMK1Q14012 370 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 FBXO43Q4G163 708 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
CDH8-201ENST00000299345 TUBA1AQ71U36 451 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 NEURL3Q96EH8 262 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 PDXPQ96GD0 296 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 PCYT1BQ9Y5K3 369 aaPredicted RBP12.94□□□□□ -0.34
CDH8-201ENST00000299345 A0A1W2PP55 124 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 FUOMA2VDF0 154 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 GLOD5A6NK44 160 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 ANHXE9PGG2 379 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 UGT2B17O75795 530 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 APODP05090 189 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 CNR2P34972 360 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 BCAP31P51572 246 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 TCEA2Q15560 299 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 CST6Q15828 149 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 UBE2UQ5VVX9 321 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 FRMPD2BQ6IN97 320 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 TSEN54Q7Z6J9 526 aaKnown RBP12.94□□□□□ -0.34
CDH8-201ENST00000299345 ANKRD53Q8N9V6 530 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
CDH8-201ENST00000299345 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 CEP19Q96LK0 163 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 Q96MT0 163 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 POLR2J3Q9H1A7 115 aaKnown RBP12.94□□□□□ -0.34
CDH8-201ENST00000299345 ABCB10Q9NRK6 738 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 P2RX2Q9UBL9 471 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 ENTPD4Q9Y227 616 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 SLC9A8Q9Y2E8 581 aa12.94□□□□□ -0.34
CDH8-201ENST00000299345 BOLA2-SMG1P6H3BVE0 249 aa12.93□□□□□ -0.34
CDH8-201ENST00000299345 GASTP01350 101 aa12.93□□□□□ -0.34
CDH8-201ENST00000299345 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
CDH8-201ENST00000299345 TNNI3P19429 210 aa12.93□□□□□ -0.34
CDH8-201ENST00000299345 NCBP2P52298 156 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDH8-201ENST00000299345 TIMM50Q3ZCQ8 353 aa12.93□□□□□ -0.34
CDH8-201ENST00000299345 ZNF404Q494X3 552 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms