RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 C16orf72Q14CZ0 275 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 COX20Q5RI15 118 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 OOSP2Q86WS3 158 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 C11orf65Q8NCR3 313 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 PYURFQ96I23 114 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 OR2A5Q96R48 311 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 C8orf4Q9NR00 106 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 RAPGEFL1Q9UHV5 662 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 ASB4Q9Y574 426 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 A0A0J9YY10 115 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 A0A1B0GVG6 124 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 C7orf72A4D263 438 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 CERS1P27544 350 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 KDELR2P33947 212 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 SPRED1Q7Z699 444 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 ZNF761Q86XN6 746 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-202ENST00000297979 GKN2Q86XP6 184 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 KCT2Q8NC54 265 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 NLNQ9BYT8 704 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 CXorf36Q9H7Y0 433 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-202ENST00000297979 RPS6KA6Q9UK32 745 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 PILRAQ9UKJ1 303 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 SNX8Q9Y5X2 465 aa13.52□□□□□ -0.24
C9orf3-202ENST00000297979 A0A0J9YVX5 310 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 OR5K3A6NET4 321 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 K7ESF4 209 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 PDLIM1O00151 329 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 ETFAP13804 333 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 BCKDHBP21953 392 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 C6orf52Q5T4I8 152 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 GCNT6Q5T4J0 391 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 AVL9Q8NBF6 648 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 LMX1AQ8TE12 382 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 GATA6Q92908 595 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 PPP1R14BQ96C90 147 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 TM4SF19Q96DZ7 209 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 EVA1BQ9NVM1 165 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 DOLKQ9UPQ8 538 aa13.52□□□□□ -0.25
C9orf3-202ENST00000297979 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ACOX3O15254 700 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 TNFRSF21O75509 655 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 PRSS23O95084 383 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ZNF682O95780 498 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 LSSP48449 732 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 RELAQ04206 551 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 VAC14Q08AM6 782 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 TEAD4Q15561 434 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ARMC6Q6NXE6 501 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 RNF130Q86XS8 419 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 SGCDQ92629 289 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 UCN3Q969E3 161 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MAL2Q969L2 176 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 OSBPL11Q9BXB4 747 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 UTS2RQ9UKP6 389 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ATG4BQ9Y4P1 393 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 A0A1W2PR48 441 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 EIF4E1BA6NMX2 242 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 RASAL1O95294 804 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 PVRP15151 417 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ZNF23P17027 643 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 CASP9P55211 416 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 NXPH1P58417 271 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 BTN3A2P78410 334 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MRPS35P82673 323 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 ROR2Q01974 943 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 HSPB3Q12988 150 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 BLMHQ13867 455 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MLC1Q15049 377 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 PRPF38BQ5VTL8 546 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 TMEFF1Q8IYR6 380 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MARVELD2Q8N4S9 558 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 C1orf216Q8TAB5 229 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 TMEM121BQ9BXQ6 578 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 LYARQ9NX58 379 aaKnown RBP13.51□□□□□ -0.25
C9orf3-202ENST00000297979 DNAJB9Q9UBS3 223 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
C9orf3-202ENST00000297979 EML5Q05BV3 1969 aa13.5□□□□□ -0.25
C9orf3-202ENST00000297979 P2RX6O15547 441 aa13.5□□□□□ -0.25
C9orf3-202ENST00000297979 PRKRAO75569 313 aaKnown RBP13.5□□□□□ -0.25
C9orf3-202ENST00000297979 AIFM1O95831 613 aa13.5□□□□□ -0.25
C9orf3-202ENST00000297979 CST1P01037 141 aa13.5□□□□□ -0.25
C9orf3-202ENST00000297979 UBTFL6P0CB48 400 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-202ENST00000297979 RBBP4Q09028 425 aa13.5□□□□□ -0.25
C9orf3-202ENST00000297979 PDK3Q15120 406 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms