RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 LRRTM2O43300 516 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 H6PDO95479 791 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ZNF28P17035 718 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 LCP2Q13094 533 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 NTRK3Q16288 839 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SFRP5Q5T4F7 317 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 RBMS3Q6XE24 437 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 OR56A1Q8NGH5 318 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SAMD11Q96NU1 681 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 CSPG4P5Q96PW8 444 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 CPEB1Q9BZB8 566 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 TCAF1Q9Y4C2 921 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PLEKHM1Q9Y4G2 1056 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SMIM28A0A1B0GU29 152 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 VSTM2BA6NLU5 285 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 APOA2P02652 100 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 BMP1P13497 986 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 MAPK3P27361 379 aaPredicted RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 TMEM44Q2T9K0 475 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PTF1AQ7RTS3 328 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 RNF175Q8N4F7 328 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ESX1Q8N693 406 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ZNF439Q8NDP4 499 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 OR13C4Q8NGS5 318 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 RDH12Q96NR8 316 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ST6GALNAC5Q9BVH7 336 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PRPF19Q9UMS4 504 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 A0A1W2PP55 124 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 F5H5K5 113 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 H7C2Y5 167 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ATP1B2P14415 290 aaPredicted RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 SMAD2Q15796 467 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 ZNF765Q7L2R6 523 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TAC4Q86UU9 113 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ZC3HC1Q86WB0 502 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 RSC1A1Q92681 617 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TXNDC15Q96J42 360 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 URM1Q9BTM9 101 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 MROQ9BYG7 248 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 RRP8O43159 456 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 RAD1O60671 282 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 CTDNEP1O95476 244 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PRPS2P11908 318 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TYRP14679 529 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PXNP49023 591 aaPredicted RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 GNB1P62873 340 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 NFE2L1Q14494 772 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 METTL2BQ6P1Q9 378 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 PQLC1Q8N2U9 271 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SLC2A12Q8TD20 617 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TMEM246Q9BRR3 403 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 MAGEH1Q9H213 219 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 FAM230AA0A1W2PPH8 454 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 CEBPZOSA8MTT3 80 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 LGALS8O00214 317 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 NIPSNAP2O75323 286 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TOXO94900 526 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 CLCN2P51788 898 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 ST3GAL3Q11203 375 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 BAIAP2L2Q6UXY1 529 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 PLPPR4Q7Z2D5 763 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SLC30A8Q8IWU4 369 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SCAMP5Q8TAC9 235 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 OR5B2Q96R09 309 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 SEMA6CQ9H3T2 930 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 ZNF99A8MXY4 864 aaPredicted RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 HEPHL1Q6MZM0 1159 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 RBMXL3Q8N7X1 1067 aaKnown RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 AURKBQ96GD4 344 aaPredicted RBP11.97□□□□□ -0.49
SLX4-201ENST00000294008 EFCAB11Q9BUY7 163 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 GPR88Q9GZN0 384 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 OPA3Q9H6K4 179 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 C2orf42Q9NWW7 574 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 HSFX1Q9UBD0 423 aa11.97□□□□□ -0.49
SLX4-201ENST00000294008 TCAPO15273 167 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 SCELO95171 688 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 PAK4O96013 591 aaPredicted RBP11.96□□□□□ -0.49
SLX4-201ENST00000294008 GDF1P27539 372 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 FOLR3P41439 243 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 MARCKSL1P49006 195 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 RPP30P78346 268 aaKnown RBP11.96□□□□□ -0.49
SLX4-201ENST00000294008 FAM26DQ5JW98 314 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 USP51Q70EK9 711 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 TMPRSS12Q86WS5 348 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 ACMSDQ8TDX5 336 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 ZDHHC1Q8WTX9 485 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 SECISBP2Q96T21 854 aaKnown RBP11.96□□□□□ -0.49
SLX4-201ENST00000294008 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.49
SLX4-201ENST00000294008 PNMTP11086 282 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 SQSTM1Q13501 440 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 MANEAQ5SRI9 462 aa11.96□□□□□ -0.49
SLX4-201ENST00000294008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms