RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 B4GALNT2Q8NHY0 566 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 CREB3L4Q8TEY5 395 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 ELSPBP1Q96BH3 223 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 HSPBAP1Q96EW2 488 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 BCL7BQ9BQE9 202 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 RAB11FIP5Q9BXF6 653 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 RMI1Q9H9A7 625 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 ZNF556Q9HAH1 456 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 LMCD1Q9NZU5 365 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 PNMA8BQ9ULN7 279 aaPredicted RBP18.99■□□□□ 0.63
CXCL16-201ENST00000293778 DOCK9Q9BZ29 2069 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 TRANK1O15050 2925 aa18.99■□□□□ 0.63
CXCL16-201ENST00000293778 SH3PXD2BA1X283 911 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 PCDH17O14917 1159 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 LINC01565O15544 149 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 LIMS1P48059 325 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 HMGA2P52926 109 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 GANABQ14697 944 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 KIAA1211LQ6NV74 962 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SLC44A2Q8IWA5 706 aaPredicted RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 AMER3Q8N944 861 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 YIPF6Q96EC8 236 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 TMEM19Q96HH6 336 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 TEFMQ96QE5 360 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 C17orf62Q9BQA9 187 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SLC17A9Q9BYT1 436 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 PBX4Q9BYU1 374 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SLC17A4Q9Y2C5 497 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 HCN4Q9Y3Q4 1203 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SNX11Q9Y5W9 270 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 DOCK8Q8NF50 2099 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 hCG_2014768A0A024R1R8 64 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 B4GALT2O60909 372 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 RECKO95980 971 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SSR2P43308 183 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 KIR2DL1P43626 348 aaPredicted RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 ST13P50502 369 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 KCNC4Q03721 635 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 PHF10Q8WUB8 498 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 RAB8BQ92930 207 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 SIGLEC11Q96RL6 698 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 RPP25Q9BUL9 199 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 TRMT61BQ9BVS5 477 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 MKRN2Q9H000 416 aaKnown RBP18.98■□□□□ 0.63
CXCL16-201ENST00000293778 GPSM3Q9Y4H4 160 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 CDH23Q9H251 3354 aa18.98■□□□□ 0.63
CXCL16-201ENST00000293778 A0A0A6YYD5 115 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 OR52A4PA6NMU1 304 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PDZK1P1A8MUH7 402 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 K7EQS6 105 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PPM1DO15297 605 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 CCNB2O95067 398 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TFPTP0C1Z6 253 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 IGFALSP35858 605 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 BMXP51813 675 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TRA2BP62995 288 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 DGCR6Q14129 220 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 SHHQ15465 462 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TTLQ8NG68 377 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 FNDC8Q8TC99 324 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 EZH1Q92800 747 aaPredicted RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 UCN3Q969E3 161 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 DPH7Q9BTV6 452 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 ACSS1Q9NUB1 689 aaPredicted RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TBC1D23Q9NUY8 699 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 LRIT2A6NDA9 550 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 RNGTTO60942 597 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TNFRSF4P43489 277 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 IDH2P48735 452 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 CCT3P49368 545 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 TP53BP2Q13625 1128 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PUM1Q14671 1186 aaKnown RBP eCLIP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 ANKRD54Q6NXT1 300 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 P2RY8Q86VZ1 359 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 FAM20CQ8IXL6 584 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 OR52E1Q8NGJ3 308 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 RHOXF1Q8NHV9 184 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PSD2Q9BQI7 771 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 AICDAQ9GZX7 198 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 PREBQ9HCU5 417 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 MRPS30Q9NP92 439 aaKnown RBP18.97■□□□□ 0.63
CXCL16-201ENST00000293778 RHCGQ9UBD6 479 aa18.97■□□□□ 0.63
CXCL16-201ENST00000293778 EPOPA6NHQ4 379 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 HMGN4O00479 90 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 KCNJ13O60928 360 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 FUT4P22083 530 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 GRK3P35626 688 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 MLLT10P55197 1068 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 C21orf59P57076 290 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 ANKDD1AQ495B1 522 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 TMEM35AQ53FP2 167 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 MIPOL1Q8TD10 442 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 ALPK1Q96QP1 1244 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 COPS4Q9BT78 406 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 C1QTNF7Q9BXJ2 289 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 SLC6A17Q9H1V8 727 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 MVB12BQ9H7P6 319 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 PLCXD1Q9NUJ7 323 aa18.96■□□□□ 0.63
CXCL16-201ENST00000293778 TAS2R7Q9NYW3 318 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms