RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PTGESO14684 152 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 SPINT3P49223 89 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 FOXK1P85037 733 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 GRB7Q14451 532 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 CHST14Q8NCH0 376 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 MSLNLQ96KJ4 702 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 RANBP9Q96S59 729 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 DCSTAMPQ9H295 470 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 WASF3Q9UPY6 502 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 TEX13CA0A0J9YWL9 993 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 MATN2O00339 956 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 S100A10P60903 97 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 BEND4Q6ZU67 534 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 SSX6Q7RTT6 188 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 ERI1Q8IV48 349 aaKnown RBP16.59■□□□□ 0.25
SHANK1-201ENST00000293441 HCFC1R1Q9NWW0 138 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 CD207Q9UJ71 328 aa16.59■□□□□ 0.25
SHANK1-201ENST00000293441 C1orf226A1L170 272 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 FGF3P11487 239 aaPredicted RBP16.58■□□□□ 0.25
SHANK1-201ENST00000293441 GNG2P59768 71 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 ABRAXAS2Q15018 415 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 TMPPEQ6ZT21 453 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 RMI1Q9H9A7 625 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 ZBTB20Q9HC78 741 aaPredicted RBP16.58■□□□□ 0.25
SHANK1-201ENST00000293441 BPIP17213 487 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 GRK5P34947 590 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 CTBP2P56545 445 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 LRIF1Q5T3J3 769 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 ZNF224Q9NZL3 707 aa16.58■□□□□ 0.25
SHANK1-201ENST00000293441 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 CNMDO75829 334 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ATP4BP51164 291 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ADAM15Q13444 863 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 WSCD2Q2TBF2 565 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 KIAA1614Q5VZ46 1190 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 PACRGLQ8N7B6 248 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 INO80EQ8NBZ0 244 aaPredicted RBP16.58■□□□□ 0.24
SHANK1-201ENST00000293441 MOCOSQ96EN8 888 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 SLC22A4Q9H015 551 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 TOR3AQ9H497 397 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 DNMT3AQ9Y6K1 912 aaPredicted RBP16.58■□□□□ 0.24
SHANK1-201ENST00000293441 CPNE6O95741 557 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 MT-ND5P03915 603 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ARSAP15289 507 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ZC3H3Q8IXZ2 948 aaKnown RBP16.58■□□□□ 0.24
SHANK1-201ENST00000293441 LMAN1LQ9HAT1 526 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 KCNK13Q9HB14 408 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ACTL7AQ9Y615 435 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 C8BP07358 591 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 H2BFMP0C1H6 154 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 NANOGP8Q6NSW7 305 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 FIGNL1Q6PIW4 674 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 SLC15A3Q8IY34 581 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 ZNF100Q8IYN0 542 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 OR51G2Q8NGK0 314 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 OR8K5Q8NH50 307 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 FIBINQ8TAL6 211 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 LINC00597Q9H2U6 94 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 NANOGQ9H9S0 305 aa16.58■□□□□ 0.24
SHANK1-201ENST00000293441 TBX10O75333 385 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 JUPP14923 745 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 MECP2P51608 486 aaKnown RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 TMED4Q7Z7H5 227 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 NINJ1Q92982 152 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 FBXL20Q96IG2 436 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 FAM129BQ96TA1 746 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 ENY2Q9NPA8 101 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 ATXN7L1Q9ULK2 861 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 CHD4Q14839 1912 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 RTCAO00442 366 aaKnown RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 SRYQ05066 204 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 DSG2Q14126 1118 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 DOC2AQ14183 400 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 DEFB110Q30KQ9 67 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 RPS3AP61247 264 aaKnown RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 NIPAL4Q0D2K0 466 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 SLC7A6OSQ96CW6 309 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 A0A096LPI6 279 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 DFNA5O60443 496 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 APBB3O95704 486 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 CEBPBP17676 345 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 ECH1Q13011 328 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 FAM189A2Q15884 450 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 OR56A3Q8NH54 315 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 SEC14L5O43304 696 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 VAMP1P23763 118 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 MAPK3P27361 379 aaPredicted RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 SOX2P48431 317 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 AKR1D1P51857 326 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 RPS26P62854 115 aaKnown RBP16.57■□□□□ 0.24
SHANK1-201ENST00000293441 FBXO43Q4G163 708 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 HUS1BQ8NHY5 278 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 MYH8P13535 1937 aa16.57■□□□□ 0.24
SHANK1-201ENST00000293441 SOCS2O14508 198 aa16.56■□□□□ 0.24
SHANK1-201ENST00000293441 HLA-DPB1P04440 258 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms