RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 HSD3B2P26439 372 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 SERPINB4P48594 390 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 SLC26A5P58743 744 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
VPS28-201ENST00000292510 BTKQ06187 659 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 STX4Q12846 297 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 NADK2Q4G0N4 442 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
VPS28-201ENST00000292510 CCNYL2Q5T2Q4 361 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 AGAP7PQ5VUJ5 663 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 CES4AQ5XG92 561 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 FCRLBQ6BAA4 426 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 RIPOR1Q6ZS17 1223 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 PAGE2Q7Z2X7 111 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 NUDCD3Q8IVD9 361 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 MMP21Q8N119 569 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 KIF2BQ8N4N8 673 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 GBP7Q8N8V2 638 aaPredicted RBP12.51□□□□□ -0.41
VPS28-201ENST00000292510 ANKRD42Q8N9B4 389 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 CHTF18Q8WVB6 975 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 AGAP4Q96P64 663 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 TRMOQ9BU70 441 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 ALOXE3Q9BYJ1 711 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 MS4A12Q9NXJ0 267 aa12.51□□□□□ -0.41
VPS28-201ENST00000292510 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 SAGE2PA6NJ88 616 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 A8MUI8 341 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 B8ZZF3 427 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 H3BQF6 201 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 AZIN1O14977 448 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 TM9SF1O15321 606 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 MYO1DO94832 1006 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 IFNA16P05015 189 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 ALPPP05187 535 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 UQCRHP07919 91 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 DHRS4L1P0CG22 281 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 NR2F6P10588 404 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 UROSP10746 265 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 ICAM2P13598 275 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 SOX11P35716 441 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 BUD31P41223 144 aaPredicted RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 RAE1P78406 368 aaKnown RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 EXT1Q16394 746 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 KANK2Q63ZY3 851 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 TEX19Q8NA77 164 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 NFAM1Q8NET5 270 aaPredicted RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 OR6Y1Q8NGX8 325 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 M1APQ8TC57 530 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 ARL8AQ96BM9 186 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 TLCD1Q96CP7 247 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 STMN4Q9H169 189 aaPredicted RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 ZNF395Q9H8N7 513 aaPredicted RBP12.5□□□□□ -0.41
VPS28-201ENST00000292510 KCNK13Q9HB14 408 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 NMRK1Q9NWW6 199 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 LUZP4Q9P127 313 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 C5AR2Q9P296 337 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 ADAM29Q9UKF5 820 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 PCDHGB7Q9Y5F8 929 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
VPS28-201ENST00000292510 A0A1W2PS29 197 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 TMEM120BA0PK00 339 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 SERTM1A2A2V5 107 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 PGRMC2O15173 223 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 ITM2AO43736 263 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 MAN1A2O60476 641 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 LYPLA1O75608 230 aaPredicted RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 ZWINTO95229 277 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 F10P00742 488 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 TLX1P31314 330 aaPredicted RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 ST13P50502 369 aaKnown RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 MAPK12P53778 367 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 FOLH1Q04609 750 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 ZNF33BQ06732 778 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 C19orf57Q0VDD7 668 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 KLRB1Q12918 225 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 CHI3L2Q15782 390 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 IMPG1Q17R60 797 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 CRB2Q5IJ48 1285 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 SH2D4BQ5SQS7 431 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 NDUFAF5Q5TEU4 345 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 ISLR2Q6UXK2 745 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 MGARPQ8TDB4 240 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 DOK4Q8TEW6 326 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 TANKQ92844 425 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 PPWD1Q96BP3 646 aaKnown RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 TM4SF18Q96CE8 201 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 NPAS2Q99743 824 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 EBPLQ9BY08 206 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 TUBB1Q9H4B7 451 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
VPS28-201ENST00000292510 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
VPS28-201ENST00000292510 PLA2G3Q9NZ20 509 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms