RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 FAM240BA0A1B0GVZ2 78 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FABP12A6NFH5 140 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RLN1P04808 185 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 GKN3PP0CG01 181 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 HTR1EP28566 365 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 METAP1P53582 386 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 DSC1Q08554 894 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RCAN2Q14206 197 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SMAD2Q15796 467 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 UGT8Q16880 541 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 NHSL2Q5HYW2 709 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C6orf132Q5T0Z8 1188 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C1orf189Q5VU69 101 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TMPRSS11AQ6ZMR5 421 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBR1-201ENST00000290650 CNTN4Q8IWV2 1026 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TRAM1L1Q8N609 369 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SLC5A8Q8N695 610 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 OR51G2Q8NGK0 314 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 GAB3Q8WWW8 586 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 UBXN10Q96LJ8 280 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 NRTNQ99748 197 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 EFCAB11Q9BUY7 163 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TMEM27Q9HBJ8 222 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CCNB1IP1Q9NPC3 277 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 KLF15Q9UIH9 416 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ANKRD33BA6NCL7 494 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 C11orf98E9PRG8 122 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SLC1A7O00341 560 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 PITPNM1O00562 1244 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 HAT1O14929 419 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 RNGTTO60942 597 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 RPS17P08708 135 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 CTSAP10619 480 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CLCN7P51798 805 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ADAM17P78536 824 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 COX20Q5RI15 118 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 HMBOX1Q6NT76 420 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 JAZF1Q86VZ6 243 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 DCUN1D3Q8IWE4 304 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF784Q8NCA9 323 aaPredicted RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 ZNF675Q8TD23 568 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SGCDQ92629 289 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 FOXN4Q96NZ1 517 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 TSSK6Q9BXA6 273 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 SLC29A3Q9BZD2 475 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 CD320Q9NPF0 282 aa4.58□□□□□ -1.68
UBR1-201ENST00000290650 MRPL15Q9P015 296 aaKnown RBP4.58□□□□□ -1.68
UBR1-201ENST00000290650 FAM86C2PA6NEL3 165 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 VILLO15195 856 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 DENRO43583 198 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 CDC40O60508 579 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR1-201ENST00000290650 REM1O75628 298 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 SBK3P0C264 359 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ACPPP15309 386 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CSNK2A2P19784 350 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 GABRA3P34903 492 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CCNJQ5T5M9 372 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 C6orf183Q5T699 404 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 C22orf42Q6IC83 251 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 Q6ZSR9 355 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 GPR135Q8IZ08 494 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 SLC15A4Q8N697 577 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TSEN15Q8WW01 171 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 S100ZQ8WXG8 99 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 PMM1Q92871 262 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 FGF13Q92913 245 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 GPR78Q96P69 363 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 DPYSL5Q9BPU6 564 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 UCK2Q9BZX2 261 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TM9SF3Q9HD45 589 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 MYEF2Q9P2K5 600 aaKnown RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 PCDHB11Q9Y5F2 797 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 HCFC2Q9Y5Z7 792 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CHD5Q8TDI0 1954 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 DAPL1A0PJW8 107 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 FAM92AA1XBS5 289 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CENPXA8MT69 81 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TMX2-CTNND1H3BSU7 103 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 SLC30A4O14863 429 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 KMOO15229 486 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CAPNS1P04632 268 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 BMPR1AP36894 532 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NAA10P41227 235 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 MLLT3P42568 568 aaPredicted RBP4.57□□□□□ -1.68
UBR1-201ENST00000290650 MASP1P48740 699 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ACADVLP49748 655 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 BMXP51813 675 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CST6Q15828 149 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 XKR4Q5GH76 650 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 LIPJQ5W064 366 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 NXPE4Q6UWF7 544 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TTLL10Q6ZVT0 673 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 GALNTL5Q7Z4T8 443 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 SMPDL3AQ92484 453 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 TGM7Q96PF1 710 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 CDADC1Q9BWV3 514 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ABCG4Q9H172 646 aa4.57□□□□□ -1.68
UBR1-201ENST00000290650 ZNF696Q9H7X3 374 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms