RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SNX29P2Q8IUI4 249 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC30A3Q99726 388 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 CACNG6Q9BXT2 260 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 KCTD3Q9Y597 815 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 BCHEP06276 602 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC35G6P0C7Q6 338 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 MPC1LP0DKB6 136 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 GDI2P50395 445 aaKnown RBP16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 VEZF1Q14119 521 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 CEACAM20Q6UY09 585 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 TMEM102Q8N9M5 508 aaPredicted RBP16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 KIAA1143Q96AT1 154 aaPredicted RBP16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 OTUB2Q96DC9 234 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 RPL10LQ96L21 214 aaKnown RBP16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 COQ10AQ96MF6 247 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 OR51I1Q9H343 314 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 SUV39H2Q9H5I1 410 aa16.83■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC10A3P09131 477 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 UQCRC1P31930 480 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 EXOC3L2Q2M3D2 409 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 LRRC69Q6ZNQ3 347 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 DZANK1Q9NVP4 752 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 DNAJC15Q9Y5T4 150 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 PRAMEF11O60813 436 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 SOD2P04179 222 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 PRKCGP05129 697 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 DPP6P42658 865 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 KCNQ1P51787 676 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 MAD2L1BPQ15013 274 aaPredicted RBP16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 SLC22A18Q96BI1 424 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 SAV1Q9H4B6 383 aaPredicted RBP16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 GKN1Q9NS71 199 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 PIGBOS1A0A0B4J2F0 54 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 IQCMA0A1B0GVH7 501 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 HLA-EP13747 358 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF30P17039 623 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 CCND3P30281 292 aaPredicted RBP16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 BMP8BP34820 402 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 ACTA2P62736 377 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 ACTG2P63267 376 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 BTN3A2P78410 334 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 RASGEF1BQ0VAM2 473 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 PLEKHS1Q5SXH7 462 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 UBE2UQ5VVX9 321 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 BMP8AQ7Z5Y6 402 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 SNAPC3Q92966 411 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 TCEAL3Q969E4 200 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 MTERF1Q99551 399 aaKnown RBP16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 MYOCQ99972 504 aa16.83■□□□□ 0.28
PCDHA13-201ENST00000289272 ANKRD66B4E2M5 251 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 CCR8P51685 355 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 SLC25A25Q6KCM7 469 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF461Q8TAF7 563 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 OPN1SWP03999 348 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 CDK1P06493 297 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 NCBP2P52298 156 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 SOX4Q06945 474 aaPredicted RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 RAB41Q5JT25 222 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 SMARCD3Q6STE5 483 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 GDPD4Q6W3E5 623 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 CREB3L2Q70SY1 520 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 OR2M2Q96R28 347 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 TMLHEQ9NVH6 421 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 TEX13CA0A0J9YWL9 993 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 LOC285095A0A1B0GVY8 99 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 CPSF4LA6NMK7 179 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 OR1I1O60431 355 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 BEST1O76090 585 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 IL1AP01583 271 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 GPX3P22352 226 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 PPP1R8Q12972 351 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF627Q7L945 461 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 LYSMD3Q7Z3D4 306 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 RETREG3Q86VR2 466 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 OR2L3Q8NG85 312 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF334Q9HCZ1 680 aaPredicted RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 KLHL21Q9UJP4 597 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 SEC14L2O76054 403 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 S1PR4O95977 384 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ACRP10323 421 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 SLC3A1Q07837 685 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 GPR19Q15760 415 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 C22orf42Q6IC83 251 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 THOC6Q86W42 341 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 FTMTQ8N4E7 242 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 PXYLP1Q8TE99 480 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 LCN9Q8WX39 176 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 OR5P2Q8WZ92 322 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 PYCR2Q96C36 320 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 IMP4Q96G21 291 aaKnown RBP16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 NLKQ9UBE8 527 aa16.82■□□□□ 0.28
PCDHA13-201ENST00000289272 ADH5P11766 374 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ZNF823P16415 610 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 GNALP38405 381 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 ELOAQ14241 798 aaKnown RBP16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 TMEM220Q6QAJ8 160 aa16.81■□□□□ 0.28
PCDHA13-201ENST00000289272 COX18Q8N8Q8 333 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms