RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 IRF4Q15306 451 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 SPANXN2Q5MJ10 180 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 CLIP4Q8N3C7 705 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 OR8J2Q8NGG1 315 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 PIK3R3Q92569 461 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 LINC00615Q96LM1 132 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 ACAT2Q9BWD1 397 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 TP63Q9H3D4 680 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 CD93Q9NPY3 652 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 FBXL12Q9NXK8 326 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 KMOO15229 486 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 SUV39H1O43463 412 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 VEGFDO43915 354 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 ADORA3P0DMS8 318 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 COL9A1P20849 921 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 RRM2P31350 389 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 SOX6P35712 828 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 RGS6P49758 472 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 UGT8Q16880 541 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 ADAMTSL4Q6UY14 1074 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 FAM124AQ86V42 546 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 AMZ2Q86W34 360 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 SYT12Q8IV01 421 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 IL17RDQ8NFM7 739 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 GPR156Q8NFN8 814 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 OR7G3Q8NG95 312 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 OR9A1PQ8NGU1 263 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 OR14C36Q8NHC7 312 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 MAGEB10Q96LZ2 347 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 DPH2Q9BQC3 489 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 RUBCNLQ9H714 662 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 LYVE1Q9Y5Y7 322 aa17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-201ENST00000284767 CCNKO75909 580 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 EGFP01133 1207 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 KRT8P05787 483 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 C5AR1P21730 350 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 C6orf183Q5T699 404 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 RSBN1Q5VWQ0 802 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 GRHL2Q6ISB3 625 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 SLCO4C1Q6ZQN7 724 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 NUDT18Q6ZVK8 323 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 DEPDC4Q8N2C3 294 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 DENND6BQ8NEG7 585 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 HUS1BQ8NHY5 278 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF514Q96K75 400 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 CCDC32Q9BV29 185 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 OR2B2Q9GZK3 357 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 OR51E2Q9H255 320 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 QPCTLQ9NXS2 382 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 EHD3Q9NZN3 535 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 VPS29Q9UBQ0 182 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 CORO2BQ9UQ03 480 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 PCDHB11Q9Y5F2 797 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 KCNE2Q9Y6J6 123 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 C17orf113A0A1B0GUU1 675 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 CCDC85CA6NKD9 419 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 ADAMDEC1O15204 470 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 PTX3P26022 381 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 ARMCX4Q5H9R4 360 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 Q6ZPB1 254 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 PRR23CQ6ZRP0 262 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF605Q86T29 641 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 STX19Q8N4C7 294 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 IL17RCQ8NAC3 791 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 ZNF740Q8NDX6 193 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 NUAK2Q9H093 628 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 PCM1Q15154 2024 aa17.45■□□□□ 0.38
PDLIM3-201ENST00000284767 SAP18O00422 153 aaKnown RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 COX7A2P14406 83 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 C21orf58P58505 322 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 COPZ1P61923 177 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 IRF3Q14653 427 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 TCEA2Q15560 299 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 C10orf62Q5T681 223 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CCDC190Q86UF4 302 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 LRRC56Q8IYG6 542 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 C9orf43Q8TAL5 461 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 RIPOR3Q96MK2 946 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 FEVQ99581 238 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CENPOQ9BU64 300 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 DOHHQ9BU89 302 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CHST8Q9H2A9 424 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 TPT1P8Q9HAU6 139 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 SPATA6Q9NWH7 488 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CFL2Q9Y281 166 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 POFUT2Q9Y2G5 429 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 PLEKHM1Q9Y4G2 1056 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 FAM172BPA6NC97 362 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 TNFRSF11BO00300 401 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 UGDHO60701 494 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 CPSF4O95639 269 aaKnown RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 ADH1BP00325 375 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 GBAP04062 536 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 ANXA8P13928 327 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 PPIBP23284 216 aaKnown RBP17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 PIK3CBP42338 1070 aa17.44■□□□□ 0.38
PDLIM3-201ENST00000284767 RPS13P62277 151 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms