RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SDR42E2A6NKP2 422 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 GOLGA8TH3BQL2 631 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 HAT1O14929 419 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 PRF1P14222 555 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 JAK1P23458 1154 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 HTR1EP28566 365 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 IMPA1P29218 277 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 XCR1P46094 333 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 RGS4P49798 205 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 SP140Q13342 867 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 KCNJ11Q14654 390 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 HERC3Q15034 1050 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 ZNF662Q6ZS27 426 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 UBE2R2Q712K3 238 aaPredicted RBP9.08□□□□□ -0.96
LRTM1-201ENST00000273286 CXXC5Q7LFL8 322 aaKnown RBP9.08□□□□□ -0.96
LRTM1-201ENST00000273286 TBC1D19Q8N5T2 526 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 OR9A4Q8NGU2 314 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 CCDC138Q96M89 665 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 PRAP1Q96NZ9 151 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 SORCS2Q96PQ0 1159 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 LPAR4Q99677 370 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 CLK4Q9HAZ1 481 aaKnown RBP9.08□□□□□ -0.96
LRTM1-201ENST00000273286 MMP25Q9NPA2 562 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 SCN2AQ99250 2005 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 PCNX1Q96RV3 2341 aa9.08□□□□□ -0.96
LRTM1-201ENST00000273286 A0A0U1RQJ8 604 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 ASPDHA6ND91 283 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 A8MUI8 341 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SCDO00767 359 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SLC16A5O15375 505 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 P2RX6O15547 441 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 FZD7O75084 574 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SEC24DO94855 1032 aaPredicted RBP9.07□□□□□ -0.96
LRTM1-201ENST00000273286 MPIG6BO95866 241 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 C8GP07360 202 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 HIST1H2AGP0C0S8 130 aaPredicted RBP9.07□□□□□ -0.96
LRTM1-201ENST00000273286 HIST1H2ADP20671 130 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 MST1P26927 711 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SSTR2P30874 369 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 RIPPLY3P57055 190 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 TBPL1P62380 186 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 MAT1AQ00266 395 aaKnown RBP9.07□□□□□ -0.96
LRTM1-201ENST00000273286 ALDH6A1Q02252 535 aaKnown RBP9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SYT16Q17RD7 645 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 Q6ZPB1 254 aaPredicted RBP9.07□□□□□ -0.96
LRTM1-201ENST00000273286 ANKRD37Q7Z713 158 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 C17orf64Q86WR6 236 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 BEST3Q8N1M1 668 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 PPFIBP2Q8ND30 876 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 MCUQ8NE86 351 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 PLPP5Q8NEB5 264 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SLC13A3Q8WWT9 602 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 TM4SF19Q96DZ7 209 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 SCMH1Q96GD3 660 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 PDLIM2Q96JY6 352 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 HIST1H2AHQ96KK5 128 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 GPR137Q96N19 417 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 HIST1H2AJQ99878 128 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 HAUS8Q9BT25 410 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 FAM167BQ9BTA0 163 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 H2AFJQ9BTM1 129 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 KCNK13Q9HB14 408 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
LRTM1-201ENST00000273286 POLQO75417 2590 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 MAGEB17A8MXT2 336 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CDC14BO60729 498 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CLDN14O95500 239 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 F10P00742 488 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CELA2AP08217 269 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CCDC175P0C221 793 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 IL1RNP18510 177 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CAPN3P20807 821 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 MPP1Q00013 466 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ACTN3Q08043 901 aaPredicted RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 GPS1Q13098 491 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ABRAXAS2Q15018 415 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 OR1C1Q15619 314 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 NSDHLQ15738 373 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CAPN13Q6MZZ7 669 aaPredicted RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 PAPD4Q6PIY7 484 aaKnown RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 LCTLQ6UWM7 567 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CYHR1Q6ZMK1 362 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 LANCL3Q6ZV70 420 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 VN1R4Q7Z5H5 301 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ASPGQ86U10 573 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 MYO1HQ8N1T3 1032 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 GHDCQ8N2G8 530 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CD200R1Q8TD46 325 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 PHF10Q8WUB8 498 aaKnown RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 GPR21Q99679 349 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 SARGQ9BW04 601 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 BTBD2Q9BX70 525 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 SYNPO2LQ9H987 977 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms