RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 TP53I11O14683 189 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PGFP49763 221 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PPP3R1P63098 170 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 GALNT1Q10472 559 aaPredicted RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 GRIK2Q13002 908 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 RNF121Q9H920 327 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
NPC1-201ENST00000269228 ZFR2Q9UPR6 939 aaKnown RBP13.12□□□□□ -0.31
NPC1-201ENST00000269228 CD2P06729 351 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 MYBPC3Q14896 1274 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 TEX26Q8N6G2 289 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 ZUFSPQ96AP4 578 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 NUAK1O60285 661 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 PRLP01236 227 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 DUSP6Q16828 381 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 CTSL3PQ5NE16 218 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 ZNF534Q76KX8 674 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 UFD1Q92890 307 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 HCN4Q9Y3Q4 1203 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 FUT4P22083 530 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 AOAHP28039 575 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 KDELR2P33947 212 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 NUDT1P36639 197 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 NFATC4Q14934 902 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 CDKL4Q5MAI5 379 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 FIGNL1Q6PIW4 674 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 ARHGAP9Q9BRR9 750 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 GPC6Q9Y625 555 aaPredicted RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 KIR2DS5A0A0G2JLQ3 304 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 A0A0G2JNG1 304 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 EFCAB9A8MZ26 197 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 KIR2DS3K7RE56 304 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 TLX2O43763 284 aaPredicted RBP13.11□□□□□ -0.31
NPC1-201ENST00000269228 PRLHRP49683 370 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 VLDLRP98155 873 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 KIR2DS5Q14953 304 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 MAPKAP1Q9BPZ7 522 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 RDH14Q9HBH5 336 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 SIT1Q9Y3P8 196 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 NUMA1Q14980 2115 aa13.11□□□□□ -0.31
NPC1-201ENST00000269228 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 ETV4P43268 484 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KCNJ5P48544 419 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 RBBP4Q09028 425 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 LCTLQ6UWM7 567 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZNF550Q7Z398 422 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 CNTN4Q8IWV2 1026 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZSWIM3Q96MP5 696 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KCNK12Q9HB15 430 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 SLC35C2Q9NQQ7 365 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 TPD52L2O43399 206 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 CERS1P27544 350 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 TAS2R38P59533 333 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 IL18Q14116 193 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 NPTX1Q15818 432 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 TYSND1Q2T9J0 566 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 STON2Q8WXE9 905 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 DIRAS2Q96HU8 199 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZBTB20Q9HC78 741 aaPredicted RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 UBAP1Q9NZ09 502 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 TNFRSF10DQ9UBN6 386 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 PADI2Q9Y2J8 665 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 CCDC182A6NF36 153 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 RBMS1P29558 406 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 CTHP32929 405 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 MLF2Q15773 248 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms