RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 UBL7Q96S82 380 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 WDR77Q9BQA1 342 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 MFRPQ9BY79 579 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 RPF2Q9H7B2 306 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 NKIRAS1Q9NYS0 192 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 PTGFRNQ9P2B2 879 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ADGRE2Q9UHX3 823 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 MRPS33Q9Y291 106 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 CLDN16Q9Y5I7 305 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 A8MUI8 341 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 MKRN2OSH3BPM6 223 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 PYCARD-AS1I3L0S3 204 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 PGRMC2O15173 223 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 PRKNO60260 465 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 SEMA3DO95025 777 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 SCELO95171 688 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 CD63P08962 238 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 UROSP10746 265 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ITGAMP11215 1152 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 PGDP52209 483 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 RRADP55042 308 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 RPL38P63173 70 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ACTN3Q08043 901 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ASPHQ12797 758 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 SOWAHCQ53LP3 525 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 NDUFAF5Q5TEU4 345 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 KANK2Q63ZY3 851 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 TMEM205Q6UW68 189 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 QSOX2Q6ZRP7 698 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 MED25Q71SY5 747 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 METTL4Q8N3J2 472 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZNF321PQ8N8H1 164 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 C9orf43Q8TAL5 461 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 CNDP1Q96KN2 507 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 FER1L6-AS2Q96M78 137 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 C1orf50Q9BV19 199 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 DDX31Q9H8H2 851 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 LIN28AQ9H9Z2 209 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 SSU72Q9NP77 194 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ATP13A2Q9NQ11 1180 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ANKRD10Q9NXR5 420 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 TSC22D4Q9Y3Q8 395 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 ASB4Q9Y574 426 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 SPACA6W5XKT8 324 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 CPAMD8Q8IZJ3 1885 aa6.79□□□□□ -1.32
DEPDC1B-201ENST00000265036 IGKV3D-11A0A0A0MRZ8 115 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TCRBV16S1A1N1A0A5B0 115 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 HRKO00198 91 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 MAN1A2O60476 641 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 NPHS1O60500 1241 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ERAL1O75616 437 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SERPINE1P05121 402 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 IL3P08700 152 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PRR35P0CG20 571 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 KITP10721 976 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TACR1P25103 407 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TAS2R50P59544 299 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 RAE1P78406 368 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 CSTF3Q12996 717 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 NIPAL1Q6NVV3 410 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 C16orf47Q6ZP98 133 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 DGAT2L6Q6ZPD8 337 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 NDUFAF7Q7L592 441 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SCUBE1Q8IWY4 988 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZCCHC7Q8N3Z6 543 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 C3orf30Q96M34 536 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SORT1Q99523 831 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 LPAR4Q99677 370 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 NPLQ9BXD5 320 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ALOXE3Q9BYJ1 711 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ROGDIQ9GZN7 287 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 BRF2Q9HAW0 419 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 LYRM4Q9HD34 91 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PRDM9Q9NQV7 894 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 RIC8BQ9NVN3 520 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 C19orf25Q9UFG5 118 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 DLGAP4Q9Y2H0 992 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 STK38LQ9Y2H1 464 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 USP9XQ93008 2570 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ZGRF1Q86YA3 2104 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 LOC102723996A0A087X1L8 192 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 CLDN4O14493 209 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 PROM1O43490 865 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SEC22BO75396 215 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 C1QL1O75973 258 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 LRATO95237 230 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 HPP00738 406 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 IGHEP01854 428 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 TIA1P31483 386 aaKnown RBP eCLIP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SLC1A6P48664 564 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 ABCE1P61221 599 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 SRSF11Q05519 484 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 AIMP2Q13155 320 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 AGBL2Q5U5Z8 902 aa6.78□□□□□ -1.32
DEPDC1B-201ENST00000265036 MRM1Q6IN84 353 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms