RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FOXE1O00358 373 aaPredicted RBP14.96□□□□□ -0.01
USE1-201ENST00000263897 OR7A17O14581 309 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 STX16O14662 325 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 PRKNO60260 465 aaPredicted RBP14.96□□□□□ -0.01
USE1-201ENST00000263897 ITGA10O75578 1167 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 CLDN9O95484 217 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 MLYCDO95822 493 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 NEK2P51955 445 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 PHEXP78562 749 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 CACNA1DQ01668 2161 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 ID2Q02363 134 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 RBPJQ06330 500 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 BIKQ13323 160 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 CUL3Q13618 768 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 ZRSR2Q15696 482 aaKnown RBP14.96□□□□□ -0.01
USE1-201ENST00000263897 LGSNQ5TDP6 509 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 TRMT10CQ7L0Y3 403 aaKnown RBP14.96□□□□□ -0.01
USE1-201ENST00000263897 GPR180Q86V85 440 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 TMEM156Q8N614 296 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 OR14A16Q8NHC5 309 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 TANKQ92844 425 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 ATP6V1E2Q96A05 226 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 MRPL57Q9BQC6 102 aaKnown RBP14.96□□□□□ -0.01
USE1-201ENST00000263897 NTMT1Q9BV86 223 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 XPR1Q9UBH6 696 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 CROCCQ5TZA2 2017 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 TRGV8A0A0C4DH27 118 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 EXOC1LA0A1B0GW35 172 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 C17orf105B2RV13 164 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 NPIPA5E9PKD4 350 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 PROM1O43490 865 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 ZG16O60844 167 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 SMIM24O75264 130 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 ABHD2P08910 425 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 COL8A1P27658 744 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 TLX1P31314 330 aaPredicted RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 BSGP35613 385 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 SSR4P51571 173 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 CCNG1P51959 295 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 IGLV3-21P80748 117 aaPredicted RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 C18orf63Q68DL7 685 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 MRM1Q6IN84 353 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 ADGRD1Q6QNK2 874 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 HSDL2Q6YN16 418 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 SIAH3Q8IW03 269 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 OR4N5Q8IXE1 308 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 TMEM151AQ8N4L1 468 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 OR52B6Q8NGF0 335 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 MTFMTQ96DP5 389 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 GPR137Q96N19 417 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 CDK15Q96Q40 435 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 ZNF717Q9BY31 904 aaPredicted RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 OR8D2Q9GZM6 311 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 MRPL46Q9H2W6 279 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 RPF2Q9H7B2 306 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 DDX31Q9H8H2 851 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 LIN28AQ9H9Z2 209 aaKnown RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 ZBTB26Q9HCK0 441 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 MYOTQ9UBF9 498 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 PHF11Q9UIL8 331 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 PCTPQ9UKL6 214 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 PPT2Q9UMR5 302 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 NPIPA1Q9UND3 350 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 KLF13Q9Y2Y9 288 aaPredicted RBP14.95□□□□□ -0.02
USE1-201ENST00000263897 ATG4BQ9Y4P1 393 aa14.95□□□□□ -0.02
USE1-201ENST00000263897 KLRC4-KLRK1H3BQV0 150 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 ASNA1O43681 348 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 FGF17O60258 216 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 EEDO75530 441 aaKnown RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 OR2J2O76002 312 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 ETHE1O95571 254 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 SBK3P0C264 359 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 GCAP28676 217 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 CA7P43166 264 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 HNRNPH2P55795 449 aaKnown RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 RNFT1Q5M7Z0 435 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 TIFABQ6ZNK6 161 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 C16orf47Q6ZP98 133 aaPredicted RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 MDGA2Q7Z553 956 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 SULF2Q8IWU5 870 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 CYP4Z2PQ8N1L4 340 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 CPSF7Q8N684 471 aaKnown RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 ZNF321PQ8N8H1 164 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 OR8K3Q8NH51 312 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 SLC2A12Q8TD20 617 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 RBM18Q96H35 190 aaKnown RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 NSUN5Q96P11 429 aaKnown RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 TSPAN10Q9H1Z9 355 aaPredicted RBP14.94□□□□□ -0.02
USE1-201ENST00000263897 ZNF835Q9Y2P0 537 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 ASB4Q9Y574 426 aa14.94□□□□□ -0.02
USE1-201ENST00000263897 A0A0A6YYD5 115 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 CCL21O00585 134 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 RIPK2O43353 540 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 PEX1O43933 1283 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 TMPRSS11DO60235 418 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 SLC19A2O60779 497 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 FAM153BP0C7A2 387 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 RHOXF2BP0C7M4 288 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 FAM58BPP0C7Q3 252 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 COX7A2P14406 83 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms