RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 TCEAL4Q96EI5 215 aa12.07□□□□□ -0.48
LIG1-201ENST00000263274 MAGEB10Q96LZ2 347 aaPredicted RBP12.07□□□□□ -0.48
LIG1-201ENST00000263274 CRNNQ9UBG3 495 aaPredicted RBP12.07□□□□□ -0.48
LIG1-201ENST00000263274 XIRP2A4UGR9 3374 aa12.07□□□□□ -0.48
LIG1-201ENST00000263274 COL4A4P53420 1690 aaPredicted RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 GLOD5A6NK44 160 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 RNASET2O00584 256 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 TGM5O43548 720 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 PRPH2P23942 346 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 RPS19P39019 145 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 GSTM5P46439 218 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 XKP51811 444 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 ALDH6A1Q02252 535 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 PIN1Q13526 163 aaPredicted RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 RAB33AQ14088 237 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 SLCO4C1Q6ZQN7 724 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 CRELD1Q96HD1 420 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 DIRAS2Q96HU8 199 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 DEPDC7Q96QD5 511 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 LYSMD1Q96S90 227 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 TTYH2Q9BSA4 534 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 ASAH2Q9NR71 780 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 GPR37L1O60883 481 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 ERAL1O75616 437 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 SEMG1P04279 462 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 C1GALT1C1LP0DN25 315 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 UGT2B10P36537 528 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 HNRNPFP52597 415 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 MAPK12P53778 367 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 KRR1Q13601 381 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 C1DQ13901 141 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 PDZK1Q5T2W1 519 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 NEK10Q6ZWH5 1172 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 HTR3DQ70Z44 454 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 SHFQ7M4L6 423 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 LAX1Q8IWV1 398 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 FAM46DQ8NEK8 389 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 ING5Q8WYH8 240 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 TBC1D20Q96BZ9 403 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 DEFB118Q96PH6 123 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 F2RL3Q96RI0 385 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 YME1L1Q96TA2 773 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 KCNK12Q9HB15 430 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 GULP1Q9UBP9 304 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 STOML2Q9UJZ1 356 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 MKLN1Q9UL63 735 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 SSR3Q9UNL2 185 aa12.06□□□□□ -0.48
LIG1-201ENST00000263274 EXO1Q9UQ84 846 aaKnown RBP12.06□□□□□ -0.48
LIG1-201ENST00000263274 FEZF1A0PJY2 475 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 SCAMP1O15126 338 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 LRRTM2O43300 516 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 SLCO2B1O94956 709 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 NPPBP16860 134 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 ATP6V1E1P36543 226 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 TM4SF4P48230 202 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 IFITM2Q01629 132 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 NFE2L1Q14494 772 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 SPHARQ15513 63 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 LRRC26Q2I0M4 334 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 ZFP69Q49AA0 526 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 NXNL2Q5VZ03 156 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 PLAG1Q6DJT9 500 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 RNF165Q6ZSG1 346 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 UCK2Q9BZX2 261 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 SMURF1Q9HCE7 757 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 IGLV3-16A0A075B6K0 115 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 WASHC1A8K0Z3 465 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 CENPXA8MT69 81 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 K7ESM1 405 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 PTTG1O95997 202 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 ADRA2AP08913 450 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 FURINP09958 794 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 TSPAN19P0C672 248 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 NR2F1P10589 423 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 TIMP2P16035 220 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 METAP1P53582 386 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 FAM214AQ32MH5 1076 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 PYDC2Q56P42 97 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 C22orf42Q6IC83 251 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 REEP3Q6NUK4 255 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 TMIGD1Q6UXZ0 262 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 WASH2PQ6VEQ5 465 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 KLHL6Q8WZ60 621 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 CITED4Q96RK1 184 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 MCCC1Q96RQ3 725 aaPredicted RBP12.05□□□□□ -0.48
LIG1-201ENST00000263274 ZSCAN5AQ9BUG6 496 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 BHLHE41Q9C0J9 482 aaPredicted RBP12.05□□□□□ -0.48
LIG1-201ENST00000263274 CXorf36Q9H7Y0 433 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 ANKHQ9HCJ1 492 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 CCDC177Q9NQR7 707 aaPredicted RBP12.05□□□□□ -0.48
LIG1-201ENST00000263274 C1GALT1Q9NS00 363 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 MUTYHQ9UIF7 546 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 HS3ST2Q9Y278 367 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 SPIN1Q9Y657 262 aaPredicted RBP12.05□□□□□ -0.48
LIG1-201ENST00000263274 PRR23AA6NEV1 266 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 UGDHO60701 494 aa12.05□□□□□ -0.48
LIG1-201ENST00000263274 NME6O75414 186 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms