RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DEPDC4Q8N2C3 294 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 OR52N2Q8NGI0 321 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 OR4D11Q8NGI4 311 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 OR5AR1Q8NGP9 310 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SLC38A5Q8WUX1 472 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 OTULINQ96BN8 352 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 COQ8BQ96D53 544 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ZFYVE19Q96K21 471 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SDHCQ99643 169 aaPredicted RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 MVB12BQ9H7P6 319 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 DMRT3Q9NQL9 472 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TAAR2Q9P1P5 351 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 PCDHGA3Q9Y5H0 932 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 PLXND1Q9Y4D7 1925 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TLR4O00206 839 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 RNASET2O00584 256 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 PRMT3O60678 531 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 RECKO95980 971 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 DSTNP60981 165 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 MRPS15P82914 257 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 SP140Q13342 867 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 LRRC26Q2I0M4 334 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CLEC12AQ5QGZ9 265 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 RNF165Q6ZSG1 346 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 GLCCI1Q86VQ1 547 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SLC39A11Q8N1S5 342 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 AMER3Q8N944 861 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SYT14Q8NB59 555 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SLC43A3Q8NBI5 491 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 VN1R2Q8NFZ6 395 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 DOK4Q8TEW6 326 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 FCGR1BQ92637 280 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TBC1D20Q96BZ9 403 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TMEM19Q96HH6 336 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SLC30A2Q9BRI3 323 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 POLR2J2Q9GZM3 115 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 PLSCR3Q9NRY6 295 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 ATG2BQ96BY7 2078 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 MYO9BQ13459 2157 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 HELZP42694 1942 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CCRL2O00421 344 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CDRT1O95170 752 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CH25HO95992 272 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 XCR1P46094 333 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 HOXC5Q00444 222 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SYPL1Q16563 259 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ZNF750Q32MQ0 723 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TCEAL5Q5H9L2 206 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 HENMT1Q5T8I9 393 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 OR2G6Q5TZ20 316 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 C22orf42Q6IC83 251 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 MSANTD1Q6ZTZ1 278 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 COMTD1Q86VU5 262 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 KIAA1958Q8N8K9 716 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 GEMIN6Q8WXD5 167 aaKnown RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 ARMC5Q96C12 935 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ARSGQ96EG1 525 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ZSWIM3Q96MP5 696 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 OPALINQ96PE5 141 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 BCL7BQ9BQE9 202 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 HOXD1Q9GZZ0 328 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CPNE5Q9HCH3 593 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TAC3Q9UHF0 121 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TMCC3Q9ULS5 477 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 UGT2A1Q9Y4X1 527 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 H7BY64 318 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 GPR37L1O60883 481 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CXCL14O95715 111 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 OLFM2O95897 454 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CYP17A1P05093 508 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ATXN8OSP0DMR3 200 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 C1GALT1C1LP0DN25 315 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 CTSAP10619 480 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TAP2Q03519 686 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 PLAG1Q6DJT9 500 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 B3GLCTQ6Y288 498 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 FAM83HQ6ZRV2 1179 aaPredicted RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 MINDY2Q8NBR6 621 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
MSH4-201ENST00000263187 FCRL1Q96LA6 429 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 PRAP1Q96NZ9 151 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 YME1L1Q96TA2 773 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 NLNQ9BYT8 704 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 HHATLQ9HCP6 504 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ASAH2Q9NR71 780 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 ENPP4Q9Y6X5 453 aa8.69□□□□□ -1.02
MSH4-201ENST00000263187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.68□□□□□ -1.02
MSH4-201ENST00000263187 SLC5A10A0PJK1 596 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 PRR23AA6NEV1 266 aa8.68□□□□□ -1.02
MSH4-201ENST00000263187 ANHXE9PGG2 379 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms