RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CLIC3O95833 236 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 F2P00734 622 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ESR1P03372 595 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PTPN6P29350 595 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 NSG1P42857 185 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 FASLGP48023 281 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TAS2R39P59534 338 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 UFM1P61960 85 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ELP2Q6IA86 826 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PDSS2Q86YH6 399 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 C1orf52Q8N6N3 182 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ISOC1Q96CN7 298 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TMEM74Q96NL1 305 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 METTL7AQ9H8H3 244 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 B3GALT1Q9Y5Z6 326 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CD8B2A6NJW9 211 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 HHLA1C9JL84 531 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 C11orf98E9PRG8 122 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CASC3O15234 703 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SLC22A2O15244 555 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LRCH4O75427 683 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CD8BP10966 210 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 FOXN2P32314 431 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 GDF10P55107 478 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TAS2R43P59537 309 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 RNF4P78317 190 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 ST3GAL3Q11203 375 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SFT2D3Q587I9 215 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CST9Q5W186 159 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SUSD3Q96L08 255 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CGREF1Q99674 301 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SOX1O00570 391 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LDB2O43679 373 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 GBAP04062 536 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 BMPR1AP36894 532 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 TRMT10BQ6PF06 316 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PDZD9Q8IXQ8 264 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 Q8N402 240 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 OR51G2Q8NGK0 314 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 DDX1Q92499 740 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 CMKLR1Q99788 373 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 SSU72Q9NP77 194 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 XPNPEP1Q9NQW7 623 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 EXOSC1Q9Y3B2 195 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
TTC39A-202ENST00000262676 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
TTC39A-202ENST00000262676 LILRB5O75023 590 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 CD3GP09693 182 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 OR8U9P0C7N5 309 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 DPY19L1Q2PZI1 675 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 GLT8D1Q68CQ7 371 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 KCNJ9Q92806 393 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 GMDSO60547 372 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 AHSA1O95433 338 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 TGM6O95932 706 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 IL3P08700 152 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 DLDP09622 509 aaKnown RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 GP1BBP13224 206 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 RBMS1P29558 406 aaKnown RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 BDKRB1P46663 353 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ERVK-25P63136 954 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 CDK6Q00534 326 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 GHRHRQ02643 423 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 FADDQ13158 208 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 AMZ2Q86W34 360 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 FAM86B1Q8N7N1 296 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 OR13C3Q8NGS6 347 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 RPLP0P6Q8NHW5 317 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 WFIKKN2Q8TEU8 576 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 OR52B2Q96RD2 323 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 RPF2Q9H7B2 306 aaKnown RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 RPS10P5Q9NQ39 176 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF223Q9UK11 482 aaPredicted RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ICKQ9UPZ9 632 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 EVI2BP34910 448 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 MOGSQ13724 837 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 PPA1Q15181 289 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ZNF852Q6ZMS4 543 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 TOR1AIP2Q8NFQ8 470 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 OR13C4Q8NGS5 318 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 KLHDC7BQ96G42 594 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 FAM83CQ9BQN1 747 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ERVK13-1Q9NX77 482 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 GRID2O43424 1007 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 IMPDH1P20839 514 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 MAP2K3P46734 347 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 OR1E2P47887 323 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 ZC3H14Q6PJT7 736 aaKnown RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 BIRC7Q96CA5 298 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 HNRNPABQ99729 332 aaKnown RBP12.37□□□□□ -0.43
TTC39A-202ENST00000262676 PCDHB16Q9NRJ7 776 aa12.37□□□□□ -0.43
TTC39A-202ENST00000262676 WRAP73Q9P2S5 460 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms