RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ERVK13-1Q9NX77 482 aa15.58■□□□□ 0.08
TM9SF1-201ENST00000261789 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
TM9SF1-201ENST00000261789 ABHD14A-ACY1A0A1B0GW23 586 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 ANTXRLA6NF34 631 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 TPST2O60704 377 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 GPX5O75715 221 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 KRT75O95678 551 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 IFNA14P01570 189 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 ARHGEF6Q15052 776 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 EIF4HQ15056 248 aaKnown RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 REEP3Q6NUK4 255 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PNCKQ6P2M8 343 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 OTUB1Q96FW1 271 aaPredicted RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 ZDHHC5Q9C0B5 715 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 SP140LQ9H930 580 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 GPC6Q9Y625 555 aaPredicted RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 RANBP2P49792 3224 aaKnown RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 A0A0G2JN53 185 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 WASHC1A8K0Z3 465 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 SNPHO15079 494 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 SH3BP5O60239 455 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PSMB5P28074 263 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PTGER1P34995 402 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PPM1AP35813 382 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 MANFP55145 182 aaKnown RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CDC20Q12834 499 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CNTN1Q12860 1018 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PRAMEF14Q5SWL7 426 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 ATAD3BQ5T9A4 648 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 PRAMEF13Q5VWM6 474 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 WASH2PQ6VEQ5 465 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 DEF8Q6ZN54 512 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 KIAA0907Q7Z7F0 614 aaPredicted RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 SLC9B2Q86UD5 537 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 SFTPA1Q8IWL2 248 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 OR4D11Q8NGI4 311 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 NXPE3Q969Y0 559 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 TMEM19Q96HH6 336 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CPNE5Q9HCH3 593 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 EXOSC4Q9NPD3 245 aaKnown RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CUEDC1Q9NWM3 386 aaPredicted RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CLN6Q9NWW5 311 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 DKK3Q9UBP4 350 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 TCF20Q9UGU0 1960 aaKnown RBP15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 CHD9Q3L8U1 2897 aa15.57■□□□□ 0.08
TM9SF1-201ENST00000261789 ISPDA4D126 451 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 C5orf58C9J3I9 102 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 WWP2O00308 870 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 UQCRC2P22695 453 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 TGM4P49221 684 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 PLAG1Q6DJT9 500 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 ANKRD53Q8N9V6 530 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 NUS1Q96E22 293 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CRELD1Q96HD1 420 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 MAPKAP1Q9BPZ7 522 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CNPPD1Q9BV87 410 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CDCA4Q9BXL8 241 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 TAC3Q9UHF0 121 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 PCDHGB6Q9Y5F9 930 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 HTR3EA5X5Y0 456 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 SAGE2PA6NJ88 616 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 H3BN98 237 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 OR10H3O60404 316 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CYP7B1O75881 506 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 C6P13671 934 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 ACADLP28330 430 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 OLR1P78380 273 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 LSM11P83369 360 aaKnown RBP eCLIP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 PRKCDQ05655 676 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 ELOAQ14241 798 aaKnown RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 TCTN3Q6NUS6 607 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 GDPD3Q7L5L3 318 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 ZNF367Q7RTV3 350 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 SZRD1Q7Z422 152 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CELF2-AS1Q8N7Q2 184 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 FBXO15Q8NCQ5 510 aaPredicted RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 APOBEC4Q8WW27 367 aaKnown RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 EXOSC8Q96B26 276 aaKnown RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 PDXPQ96GD0 296 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 ZNF717Q9BY31 904 aaPredicted RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 NUAK2Q9H093 628 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 TM7SF3Q9NS93 570 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 CCDC59Q9P031 241 aaKnown RBP15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 REV1Q9UBZ9 1251 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 KLK4Q9Y5K2 254 aa15.56■□□□□ 0.08
TM9SF1-201ENST00000261789 EFCAB10A6NFE3 127 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 CCRL2O00421 344 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 HAT1O14929 419 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 KMOO15229 486 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 SRPRAP08240 638 aaKnown RBP15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 RPL3P39023 403 aaKnown RBP15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 DGKGP49619 791 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 MAPK12P53778 367 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 ZNF45Q02386 682 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 DHCR24Q15392 516 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 BCL7AQ4VC05 210 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 TUBA3EQ6PEY2 450 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 PAQR6Q6TCH4 344 aa15.55■□□□□ 0.08
TM9SF1-201ENST00000261789 CCBE1Q6UXH8 406 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms