RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MINDY4Q4G0A6 757 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 C10orf62Q5T681 223 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-201ENST00000260130 MFSD4BQ5TF39 518 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 KIRREL2Q6UWL6 708 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 UBE3DQ7Z6J8 389 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 TBC1D20Q96BZ9 403 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 FER1L6-AS2Q96M78 137 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 SERINC2Q96SA4 455 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 TBCDQ9BTW9 1192 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 ROGDIQ9GZN7 287 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 GSTO2Q9H4Y5 243 aa15.8■□□□□ 0.12
SDCBP-201ENST00000260130 SCN3AQ9NY46 2000 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 B3GALT2O43825 422 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 OR4F21O95013 312 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 FHP07954 510 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 MTTPP55157 894 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CHAF1BQ13112 559 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 RUNX2Q13950 521 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CPZQ66K79 652 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 OR52E8Q6IFG1 317 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 C10orf107Q8IVU9 208 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CA13Q8N1Q1 262 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 EXD3Q8N9H8 876 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 VPS50Q96JG6 964 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CLPTM1LQ96KA5 538 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CENPKQ9BS16 269 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 VN1R1Q9GZP7 353 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 ELOVL6Q9H5J4 265 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 COPS7BQ9H9Q2 264 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-201ENST00000260130 TRPS1Q9UHF7 1281 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 SAP18O00422 153 aaKnown RBP15.79■□□□□ 0.12
SDCBP-201ENST00000260130 PCDH17O14917 1159 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 ITM2AO43736 263 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CYC1P08574 325 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 RNH1P13489 461 aaKnown RBP15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CPOXP36551 454 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CUL3Q13618 768 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 PCLAFQ15004 111 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 AP5B1Q2VPB7 878 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CFAP157Q5JU67 520 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 DCAF10Q5QP82 559 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 LIPMQ5VYY2 423 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 FAAH2Q6GMR7 532 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 GPRIN3Q6ZVF9 776 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 RGMAQ96B86 450 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 BBC3Q96PG8 261 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-201ENST00000260130 RBCK1Q9BYM8 510 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 ADNPQ9H2P0 1102 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 LANCL2Q9NS86 450 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 PPT2Q9UMR5 302 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 SNX6Q9UNH7 406 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 CCDC88CQ9P219 2028 aa15.79■□□□□ 0.12
SDCBP-201ENST00000260130 OR2W5A6NFC9 320 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 PSMD12O00232 456 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-201ENST00000260130 ALOX12BO75342 701 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 LYPLA1O75608 230 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-201ENST00000260130 CDC123O75794 336 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-201ENST00000260130 JAK1P23458 1154 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 EFNA3P52797 238 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 PKNOX1P55347 436 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 LY6DQ14210 128 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 KBTBD2Q8IY47 623 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 CDYL2Q8N8U2 506 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 OR11G2Q8NGC1 345 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 METTL21AQ8WXB1 218 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 C8orf44Q96CB5 159 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 MESP1Q9BRJ9 268 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 FBXL4Q9UKA2 621 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 CACNA1GO43497 2377 aa15.78■□□□□ 0.12
SDCBP-201ENST00000260130 RTCAO00442 366 aaKnown RBP15.77■□□□□ 0.12
SDCBP-201ENST00000260130 TRIM13O60858 407 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 DNAJB5O75953 348 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ESRRBO95718 433 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 BAG2O95816 211 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ACPPP15309 386 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ATP5A1P25705 553 aaKnown RBP15.77■□□□□ 0.12
SDCBP-201ENST00000260130 CERS1P27544 350 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 TSFMP43897 325 aaKnown RBP15.77■□□□□ 0.12
SDCBP-201ENST00000260130 CCL11P51671 97 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ARFIP1P53367 373 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 OR4C11Q6IEV9 310 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 TMEM205Q6UW68 189 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 IZUMO2Q6UXV1 221 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ZNF793Q6ZN11 406 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 FRMD7Q6ZUT3 714 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ACOT4Q8N9L9 421 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ECSITQ9BQ95 431 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 TUBD1Q9UJT1 453 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 FAM208BQ5VWN6 2430 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 PIEZO2Q9H5I5 2752 aa15.77■□□□□ 0.12
SDCBP-201ENST00000260130 ENO4A6NNW6 628 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 B4GALT2O60909 372 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 ETHE1O95571 254 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 C8orf89P0DMQ9 161 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 ALOX15P16050 662 aaPredicted RBP15.77■□□□□ 0.11
SDCBP-201ENST00000260130 HIST1H1TP22492 207 aaPredicted RBP15.77■□□□□ 0.11
SDCBP-201ENST00000260130 SSR2P43308 183 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 ASPHQ12797 758 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 KCNAB2Q13303 367 aa15.77■□□□□ 0.11
SDCBP-201ENST00000260130 SGO1Q5FBB7 561 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms