RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PYY3Q5JQD4 70 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CIAPIN1Q6FI81 312 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 C16orf46Q6P387 395 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 PLD3Q8IV08 490 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 OR4Q3Q8NH05 313 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 AP3S1Q92572 193 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 Q96MT0 163 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 RNF2Q99496 336 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 MID1IP1Q9NPA3 183 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 OPN4Q9UHM6 478 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CD84Q9UIB8 345 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 OSGIN1Q9UJX0 560 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ANAPC7Q9UJX3 599 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 PRPF19Q9UMS4 504 aaKnown RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SPACA6W5XKT8 324 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 USP42Q9H9J4 1324 aaKnown RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF609O15014 1411 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TLX3O43711 291 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MPC2O95563 127 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LALBAP00709 142 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MYOGP15173 224 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PAX1P15863 534 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 IL11P20809 199 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CD200P41217 278 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TGM4P49221 684 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 INSM1Q01101 510 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 NFIXQ14938 502 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CHI3L2Q15782 390 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CERCAMQ5T4B2 595 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 OR6B2Q6IFH4 312 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ADNP2Q6IQ32 1131 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PLET1Q6UQ28 207 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 G2E3Q7L622 706 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SLITRK4Q8IW52 837 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SKA3Q8IX90 412 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LRRC57Q8N9N7 239 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 IL31RAQ8NI17 732 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LRTOMTQ8WZ04 291 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SMPDL3AQ92484 453 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 HAS2Q92819 552 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MUL1Q969V5 352 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ADIPOR1Q96A54 375 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF764Q96H86 408 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 NECAB3Q96P71 396 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ALKBH3Q96Q83 286 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ERGIC2Q96RQ1 377 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PIGQQ9BRB3 760 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 LXNQ9BS40 222 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 WDR55Q9H6Y2 383 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 RNF121Q9H920 327 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ERVK-5Q9HDB9 667 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SSU72Q9NP77 194 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ZCCHC3Q9NUD5 404 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF282Q9UDV7 671 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SERGEFQ9UGK8 458 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ING4Q9UNL4 249 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 INSL6Q9Y581 213 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FLT4P35916 1363 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 A0A087X0B3 334 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 A4D1N5 150 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 DRGXA6NNA5 263 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SOCS2O14508 198 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 EREGO14944 169 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CHST10O43529 356 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CLIC3O95833 236 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CFDP00746 253 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SNRPCP09234 159 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PROZP22891 400 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 YWHAQP27348 245 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 AVPR2P30518 371 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CA5AP35218 305 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ALDH3B1P43353 468 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FHITP49789 147 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 EPHB3P54753 998 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 FAAP100Q0VG06 881 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 GPS1Q13098 491 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TRAF3Q13114 568 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PWP1Q13610 501 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SLBPQ14493 270 aaKnown RBP eCLIP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ARMC12Q5T9G4 340 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 ARL6IP4Q66PJ3 421 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 STRADAQ7RTN6 431 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SSX6Q7RTT6 188 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TOP1MTQ969P6 601 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 MARK4Q96L34 752 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 CPNE1Q99829 537 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 SRRQ9GZT4 340 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 NXF3Q9H4D5 531 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TMEM138Q9NPI0 162 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PACSIN3Q9UKS6 424 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 INTS6Q9UL03 887 aaKnown RBP7.41□□□□□ -1.22
GPNMB-201ENST00000258733 PADI2Q9Y2J8 665 aa7.41□□□□□ -1.22
GPNMB-201ENST00000258733 TBC1D3KA0A087X1G2 549 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms