RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SHBGP04278 402 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 DCNP07585 359 aaKnown RBP12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 CTSKP43235 329 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 TAS2R38P59533 333 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC22A16Q86VW1 577 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 CCDC54Q8NEL0 328 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 COL21A1Q96P44 957 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 TAS2R7Q9NYW3 318 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC2A6Q9UGQ3 507 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 HCRTR2O43614 444 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 UBOX5O94941 541 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF542PQ5EBM4 170 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 CYP2R1Q6VVX0 501 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 TMEM139Q8IV31 216 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 FCGR1BQ92637 280 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 PYCR2Q96C36 320 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 SCGB3A2Q96PL1 93 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 MGAT4BQ9UQ53 548 aa12.83□□□□□ -0.36
PRPF38A-201ENST00000257181 GLB1P16278 677 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 HK1P19367 917 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MSX1P28360 303 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 SMSP52788 366 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 RAPSNQ13702 412 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PPP1R35Q8TAP8 253 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 FCRL4Q96PJ5 515 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 KLF13Q9Y2Y9 288 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 E7ESA3 106 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PDLIM1O00151 329 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 RGS5O15539 181 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ATP6AP2O75787 350 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 GLSO94925 669 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 VNN2O95498 520 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF12P17014 697 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 HOXB9P17482 250 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 GABRA3P34903 492 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC18A2Q05940 514 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 AMER2Q8N7J2 671 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC6A5Q9Y345 797 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MAGED1Q9Y5V3 778 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 A0A1W2PPM1 405 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 UNC5CO95185 931 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 DCKP27707 260 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MNDAP41218 407 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 COQ5Q5HYK3 327 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PPM1JQ5JR12 505 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 NOXRED1Q6NXP6 359 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 RAB11FIP2Q7L804 512 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 TSPAN14Q8NG11 270 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 OR8J3Q8NGG0 315 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 DNAJA4Q8WW22 397 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PTERQ96BW5 349 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 OR51B5Q9H339 312 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ABLIM1O14639 778 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ITGA10O75578 1167 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 IGFBP5P24593 272 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 LCN1P31025 176 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 HOXC8P31273 242 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 CDKN1CP49918 316 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PCBD1P61457 104 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 TRAF3Q13114 568 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 TAZQ16635 292 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 C1orf189Q5VU69 101 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 SUSD1Q6UWL2 747 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 GPALPP1Q8IXQ4 340 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PROKR2Q8NFJ6 384 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 OR5T3Q8NGG3 340 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 TESCQ96BS2 214 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 IL26Q9NPH9 171 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PDP1Q9P0J1 537 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 A0A1B0GX78 115 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MAGEA6P43360 314 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 AP3S2P59780 193 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 ARF5P84085 180 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 QSOX2Q6ZRP7 698 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
PRPF38A-201ENST00000257181 PGRMC2O15173 223 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 OXSR1O95747 527 aaPredicted RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 JUNP05412 331 aaKnown RBP12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 GYS2P54840 703 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CYP27C1Q4G0S4 372 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 CLEC6AQ6EIG7 209 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 GID4Q8IVV7 300 aa12.81□□□□□ -0.36
PRPF38A-201ENST00000257181 IPCEF1Q8WWN9 437 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms