RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TTC19Q6DKK2 380 aaPredicted RBP21.41■■□□□ 1.02
LSM4-201ENST00000252816 FAM180AQ6UWF9 173 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 OR4N5Q8IXE1 308 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 CNPY4Q8N129 248 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 ARMC10Q8N2F6 343 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 SUN3Q8TAQ9 357 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 THAP3Q8WTV1 239 aaPredicted RBP21.41■■□□□ 1.02
LSM4-201ENST00000252816 PTPMT1Q8WUK0 201 aaPredicted RBP21.41■■□□□ 1.02
LSM4-201ENST00000252816 VMP1Q96GC9 406 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 SERPINI1Q99574 410 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 HES7Q9BYE0 225 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 FARSBQ9NSD9 589 aaKnown RBP21.41■■□□□ 1.02
LSM4-201ENST00000252816 PHF11Q9UIL8 331 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 ASB4Q9Y574 426 aa21.41■■□□□ 1.02
LSM4-201ENST00000252816 BLACEA4D250 179 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 PROM1O43490 865 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 SUPT7LO94864 414 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 SEMA3DO95025 777 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 PRKAA2P54646 552 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 IFT88Q13099 833 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 INAQ16352 499 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 ZNF324BQ6AW86 544 aaPredicted RBP21.4■■□□□ 1.02
LSM4-201ENST00000252816 SPINK14Q6IE38 97 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 TMEM132CQ8N3T6 1108 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 BCORP1Q8N888 145 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 PRR7Q8TB68 274 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 SLX1AQ9BQ83 275 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 ELOVL6Q9H5J4 265 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 RPF2Q9H7B2 306 aaKnown RBP21.4■■□□□ 1.02
LSM4-201ENST00000252816 MS4A12Q9NXJ0 267 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 DCDC2Q9UHG0 476 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 HIVEP3Q5T1R4 2406 aa21.4■■□□□ 1.02
LSM4-201ENST00000252816 POLEQ07864 2286 aa21.39■■□□□ 1.02
LSM4-201ENST00000252816 SVILO95425 2214 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 A0A1W2PR48 441 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 SYNDIG1LA6NDD5 238 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 WASHC1A8K0Z3 465 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 PRKNO60260 465 aaPredicted RBP21.39■■□□□ 1.01
LSM4-201ENST00000252816 SEMA7AO75326 666 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 NEURL1O76050 574 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 GBAP04062 536 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 FAM58BPP0C7Q3 252 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 IMPDH1P20839 514 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 IGLV3-21P80748 117 aaPredicted RBP21.39■■□□□ 1.01
LSM4-201ENST00000252816 OC90Q02509 493 aaPredicted RBP21.39■■□□□ 1.01
LSM4-201ENST00000252816 SRSF11Q05519 484 aaKnown RBP21.39■■□□□ 1.01
LSM4-201ENST00000252816 SERTAD2Q14140 314 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 RASA2Q15283 850 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 C10orf62Q5T681 223 aaPredicted RBP21.39■■□□□ 1.01
LSM4-201ENST00000252816 FHL5Q5TD97 284 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 ST6GALNAC3Q8NDV1 305 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 PPCSQ9HAB8 311 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 KLHL1Q9NR64 748 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 OLAHQ9NV23 265 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 CLCA3PQ9Y6N3 262 aa21.39■■□□□ 1.01
LSM4-201ENST00000252816 GLRA3O75311 464 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 OR4F21O95013 312 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 RASAL1O95294 804 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 DDAH2O95865 285 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 PDYNP01213 254 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 KRT15P19012 456 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 PMP22Q01453 160 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 CYP20A1Q6UW02 462 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 ZNF227Q86WZ6 799 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 NUDT13Q86X67 352 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 ZNF321PQ8N8H1 164 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 MYRIPQ8NFW9 859 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 OR2W6PQ8NHA6 318 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 OR14A16Q8NHC5 309 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 TANKQ92844 425 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 DAZLQ92904 295 aaKnown RBP21.38■■□□□ 1.01
LSM4-201ENST00000252816 UCN3Q969E3 161 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 L3HYPDHQ96EM0 354 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 SCMH1Q96GD3 660 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 ZNF382Q96SR6 550 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 MRPL1Q9BYD6 325 aaKnown RBP21.38■■□□□ 1.01
LSM4-201ENST00000252816 LYARQ9NX58 379 aaKnown RBP21.38■■□□□ 1.01
LSM4-201ENST00000252816 LRFN1Q9P244 771 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 TRPS1Q9UHF7 1281 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 PCDHGB6Q9Y5F9 930 aa21.38■■□□□ 1.01
LSM4-201ENST00000252816 TMEM200CA6NKL6 621 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 C17orf105B2RV13 164 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 G3V2L1 256 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 SLU7O95391 586 aaKnown RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 EDN3P14138 238 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 TNNI3P19429 210 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 TLX1P31314 330 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 BUD31P41223 144 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 TDGF1P3P51864 188 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 FOLH1Q04609 750 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 TCHHL1Q5QJ38 904 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 C16orf47Q6ZP98 133 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 SLC22A9Q8IVM8 553 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 CDYL2Q8N8U2 506 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 MORN4Q8NDC4 146 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 SELENOMQ8WWX9 145 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 NR4A3Q92570 626 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 OR8D2Q9GZM6 311 aa21.37■■□□□ 1.01
LSM4-201ENST00000252816 TRIM45Q9H8W5 580 aaPredicted RBP21.37■■□□□ 1.01
LSM4-201ENST00000252816 LIN28AQ9H9Z2 209 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms