RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CROCCP2Q86T23 111 aa22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 HOMEZQ8IX15 550 aa22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 B3GNT7Q8NFL0 401 aa22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 CPT1CQ8TCG5 803 aa22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 DAZLQ92904 295 aaKnown RBP22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 SLC12A4Q9UP95 1085 aa22.77■■□□□ 1.24
SDF2L1-201ENST00000248958 ARHGAP10A1A4S6 786 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 A8MUA0 341 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 TGFBR3LH3BV60 316 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 MANBAO00462 879 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 PROM1O43490 865 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 EEDO75530 441 aaKnown RBP22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 MYO1DO94832 1006 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 IFNA16P05015 189 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 CLCN2P51788 898 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 NAGLUP54802 743 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 HNRNPH2P55795 449 aaKnown RBP22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 FOXK1P85037 733 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 INPP5JQ15735 1006 aaPredicted RBP22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 GBP7Q8N8V2 638 aaPredicted RBP22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 AGAP11Q8TF27 550 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 MIB2Q96AX9 1013 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 CNDP1Q96KN2 507 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 FARSBQ9NSD9 589 aaKnown RBP22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 ATG4BQ9Y4P1 393 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 ASB4Q9Y574 426 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 CLCA3PQ9Y6N3 262 aa22.76■■□□□ 1.23
SDF2L1-201ENST00000248958 TMPRSS11DO60235 418 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 LDB3O75112 727 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 GUCY1B2O75343 617 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 IGLV3-21P80748 117 aaPredicted RBP22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 KRT71Q3SY84 523 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 ACER2Q5QJU3 275 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 RPUSD3Q6P087 351 aaKnown RBP22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 FRMD7Q6ZUT3 714 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 CUZD1Q86UP6 607 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 VMP1Q96GC9 406 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 MRPL1Q9BYD6 325 aaKnown RBP22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 MID1IP1Q9NPA3 183 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 LUZP4Q9P127 313 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 VPS29Q9UBQ0 182 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 PCDHGA10Q9Y5H3 936 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 CSAG2Q9Y5P2 127 aa22.75■■□□□ 1.23
SDF2L1-201ENST00000248958 TRAV17A0A0B4J275 112 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 SERTM1A2A2V5 107 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 OR5H15A6NDH6 313 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 TRIM13O60858 407 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 ERLIN1O75477 346 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 WDPCPO95876 746 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 TNFSF10P50591 281 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 CCNYL2Q5T2Q4 361 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 C18orf63Q68DL7 685 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 ATCAYQ86WG3 371 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 CRLF3Q8IUI8 442 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 MORN4Q8NDC4 146 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 OR14A16Q8NHC5 309 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 SUN3Q8TAQ9 357 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 ANKRD9Q96BM1 317 aaPredicted RBP22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 PELOQ9BRX2 385 aaKnown RBP22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 DEFB126Q9BYW3 111 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 C12orf65Q9H3J6 166 aaKnown RBP22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 PLA2G3Q9NZ20 509 aa22.74■■□□□ 1.23
SDF2L1-201ENST00000248958 RGS16O15492 202 aaPredicted RBP22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 ZIC2O95409 532 aaPredicted RBP22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 KLK1P06870 262 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 NR2F6P10588 404 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 COX7A2P14406 83 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 TNNI3P19429 210 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 TPP2P29144 1249 aaPredicted RBP22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 DEKP35659 375 aaKnown RBP22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 ZNF844Q08AG5 666 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 PCLAFQ15004 111 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 RPS19BP1Q86WX3 136 aaKnown RBP22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 AMER2Q8N7J2 671 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 APCDD1LQ8NCL9 501 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 TRMOQ9BU70 441 aa22.73■■□□□ 1.23
SDF2L1-201ENST00000248958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■□□□□ 10.8
SDF2L1-201ENST00000248958 A0A1W2PR48 441 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 DYRK3O43781 588 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 FGF17O60258 216 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 STT3AP46977 705 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 GPR143P51810 404 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 TBL3Q12788 808 aaKnown RBP22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 TCHHL1Q5QJ38 904 aaPredicted RBP22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 COMMD6Q7Z4G1 85 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 C10orf107Q8IVU9 208 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 BEST3Q8N1M1 668 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 ARMC10Q8N2F6 343 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 KIF2BQ8N4N8 673 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 CATSPER1Q8NEC5 780 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 OR1N1Q8NGS0 311 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 TCP10LQ8TDR4 215 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 SREK1Q8WXA9 508 aaKnown RBP22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 RBM18Q96H35 190 aaKnown RBP22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 DGAT2Q96PD7 388 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 FAM111AQ96PZ2 611 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 CDCP1Q9H5V8 836 aa22.72■■□□□ 1.23
SDF2L1-201ENST00000248958 UBFD1O14562 309 aaKnown RBP22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 VPS4BO75351 444 aa22.71■■□□□ 1.23
SDF2L1-201ENST00000248958 SPAG7O75391 227 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms