RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 OTUB1Q96FW1 271 aaPredicted RBP16.52■□□□□ 0.23
LRFN3-201ENST00000246529 WFDC6Q9BQY6 131 aa16.52■□□□□ 0.23
LRFN3-201ENST00000246529 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.23
LRFN3-201ENST00000246529 IMP3Q9NV31 184 aaKnown RBP16.52■□□□□ 0.23
LRFN3-201ENST00000246529 COL4A3Q01955 1670 aa16.52■□□□□ 0.23
LRFN3-201ENST00000246529 IGKV1-8A0A0C4DH67 115 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 NDUFS4O43181 175 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 GASTP01350 101 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 IFNA14P01570 189 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 HOXB3P14651 431 aaPredicted RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 C2orf27AQ580R0 203 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 DCDC5Q6ZRR9 648 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 RBM45Q8IUH3 476 aaKnown RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 CENPSQ8N2Z9 138 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 HDDC3Q8N4P3 179 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 GPR32P1Q8NGA4 272 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 PHF10Q8WUB8 498 aaKnown RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 OR5P2Q8WZ92 322 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 NEURL3Q96EH8 262 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 PDXPQ96GD0 296 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 AICDAQ9GZX7 198 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 IGFLR1Q9H665 355 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 WDR26Q9H7D7 661 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 SPATA7Q9P0W8 599 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 ZFR2Q9UPR6 939 aaKnown RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 C5orf58C9J3I9 102 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 SEMA7AO75326 666 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 SEMA3DO95025 777 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 CCNB2O95067 398 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 IFNW1P05000 195 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 STSP08842 583 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 EN2P19622 333 aaPredicted RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 CSNK1G2P78368 415 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 ELOAQ14241 798 aaKnown RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 ARHGAP19Q14CB8 494 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 MAPK11Q15759 364 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 LEXMQ3ZCV2 418 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 C6orf120Q7Z4R8 191 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 HMGN2P46Q86SG4 172 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 TEFMQ96QE5 360 aaKnown RBP16.51■□□□□ 0.23
LRFN3-201ENST00000246529 C17orf62Q9BQA9 187 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 ZNF556Q9HAH1 456 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 NECTIN3Q9NQS3 549 aa16.51■□□□□ 0.23
LRFN3-201ENST00000246529 C2orf16Q68DN1 1984 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TRBV4-1A0A0J9YWV2 114 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 GLOD5A6NK44 160 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 OR52A4PA6NMU1 304 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 M0R082 166 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 KMOO15229 486 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 RPN2P04844 631 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 SOX9P48436 509 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 SEC13P55735 322 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 PCBP4P57723 403 aaKnown RBP16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TP53BP2Q13625 1128 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 HEPACAMQ14CZ8 416 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TCEA2Q15560 299 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 VANGL1Q8TAA9 524 aaPredicted RBP16.5■□□□□ 0.23
LRFN3-201ENST00000246529 DYNC2LI1Q8TCX1 351 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 ALPK1Q96QP1 1244 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TMEM106CQ9BVX2 250 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TEX101Q9BY14 249 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 SERHL2Q9H4I8 314 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TAS2R16Q9NYV7 291 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 MOSPD1Q9UJG1 213 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 HCN4Q9Y3Q4 1203 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 GABRB1P18505 474 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 POU1F1P28069 291 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 PXNP49023 591 aaPredicted RBP16.5■□□□□ 0.23
LRFN3-201ENST00000246529 PTGES3Q15185 160 aaKnown RBP16.5■□□□□ 0.23
LRFN3-201ENST00000246529 UBE2UQ5VVX9 321 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 PAGE2Q7Z2X7 111 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 ADCK1Q86TW2 530 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 OR5D16Q8NGK9 328 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 LGALS12Q96DT0 336 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 KXD1Q9BQD3 176 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 BTBD2Q9BX70 525 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 SLC6A17Q9H1V8 727 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 KLHL31Q9H511 634 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 NMNAT1Q9HAN9 279 aaPredicted RBP16.5■□□□□ 0.23
LRFN3-201ENST00000246529 DUSP12Q9UNI6 340 aa16.5■□□□□ 0.23
LRFN3-201ENST00000246529 TRPM6Q9BX84 2022 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CLCA1A8K7I4 914 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CLDN25C9JDP6 229 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 HMGN4O00479 90 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 IGFBP1P08833 259 aaPredicted RBP16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CD72P21854 359 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CBLP22681 906 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CXCR2P25025 360 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 CRISP3P54108 245 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 KLHL17Q6TDP4 642 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 NUDT13Q86X67 352 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 OR4D11Q8NGI4 311 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 APOBEC4Q8WW27 367 aaKnown RBP16.49■□□□□ 0.23
LRFN3-201ENST00000246529 JPH3Q8WXH2 748 aaPredicted RBP16.49■□□□□ 0.23
LRFN3-201ENST00000246529 ITPAQ9BY32 194 aa16.49■□□□□ 0.23
LRFN3-201ENST00000246529 SFXN1Q9H9B4 322 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms