RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 TRIM40Q6P9F5 258 aa17.72■□□□□ 0.43
CHPF-201ENST00000243776 CASP12Q6UXS9 341 aa17.72■□□□□ 0.43
CHPF-201ENST00000243776 PCSK9Q8NBP7 692 aaKnown RBP17.72■□□□□ 0.43
CHPF-201ENST00000243776 C2orf15Q8WU43 125 aaKnown RBP17.72■□□□□ 0.43
CHPF-201ENST00000243776 KLHL6Q8WZ60 621 aa17.72■□□□□ 0.43
CHPF-201ENST00000243776 MIXL1Q9H2W2 232 aa17.72■□□□□ 0.43
CHPF-201ENST00000243776 RPRD1BQ9NQG5 326 aaKnown RBP17.72■□□□□ 0.43
CHPF-201ENST00000243776 SPIN1Q9Y657 262 aaPredicted RBP17.72■□□□□ 0.43
CHPF-201ENST00000243776 IGLV3-16A0A075B6K0 115 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 H0YIV9 168 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 CSF3P09919 207 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 CSTF2P33240 577 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHPF-201ENST00000243776 SLX4IPQ5VYV7 408 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 MED27Q6P2C8 311 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 SYCE2Q6PIF2 218 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 C19orf48Q6RUI8 117 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 C16orf78Q8WTQ4 265 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 C1GALT1C1Q96EU7 318 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 TMEM80Q96HE8 168 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 SNX18Q96RF0 628 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 MAPKAP1Q9BPZ7 522 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 SLC6A16Q9GZN6 736 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 TMEM39AQ9NV64 488 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 SSR3Q9UNL2 185 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 DPM1O60762 260 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 PXNP49023 591 aaPredicted RBP17.71■□□□□ 0.43
CHPF-201ENST00000243776 XKP51811 444 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 FKBP1BP68106 108 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 GALK2Q01415 458 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 PIN1Q13526 163 aaPredicted RBP17.71■□□□□ 0.43
CHPF-201ENST00000243776 CCDC85BQ15834 202 aaPredicted RBP17.71■□□□□ 0.43
CHPF-201ENST00000243776 C22orf39Q6P5X5 142 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 KRT73Q86Y46 540 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 LAS2Q8IYD9 372 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 UCK2Q9BZX2 261 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 TRPV5Q9NQA5 729 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 TMCC3Q9ULS5 477 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 PLAGL1Q9UM63 463 aa17.71■□□□□ 0.43
CHPF-201ENST00000243776 PLXNB3Q9ULL4 1909 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 A0A075B6Q4 140 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 C5orf58C9J3I9 102 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 MYL12BO14950 172 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 FURINP09958 794 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 MYL9P24844 172 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 APEX1P27695 318 aaKnown RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 GABRR2P28476 465 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 SCN1BQ07699 218 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 CAMK2BQ13554 666 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GPR162Q16538 588 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 ERAP2Q6P179 960 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 RASGEF1AQ8N9B8 481 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 OR4D11Q8NGI4 311 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GATAD2BQ8WXI9 593 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 PRR14Q9BWN1 585 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 RACGAP1Q9H0H5 632 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 POLR2J3Q9H1A7 115 aaKnown RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 MVB12BQ9H7P6 319 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 CXorf36Q9H7Y0 433 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 ASAH2Q9NR71 780 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GPR52Q9Y2T5 361 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 PCDHGB2Q9Y5G2 931 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 KCNE2Q9Y6J6 123 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 UGT2B17O75795 530 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 NCR1O76036 304 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GPC1P35052 558 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 TBPL1P62380 186 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 EEF1A2Q05639 463 aaKnown RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 SPIN4Q56A73 249 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 DEFB128Q7Z7B8 93 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 RNF180Q86T96 592 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 PHC2Q8IXK0 858 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 HORMAD2Q8N7B1 307 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 SLC7A6Q92536 515 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 IL17FQ96PD4 163 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GFM1Q96RP9 751 aaKnown RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 MIEF1Q9NQG6 463 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 THSD1Q9NS62 852 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 GIMAP4Q9NUV9 329 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 LSM2Q9Y333 95 aaKnown RBP17.7■□□□□ 0.42
CHPF-201ENST00000243776 MAU2Q9Y6X3 613 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 PLXND1Q9Y4D7 1925 aa17.7■□□□□ 0.42
CHPF-201ENST00000243776 HEPACAM2A8MVW5 462 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 CA12O43570 354 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 NTN1O95631 604 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 RHCEP18577 417 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 DDOSTP39656 456 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 ETV5P41161 510 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 KIR2DL3P43628 341 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 LIMS1P48059 325 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 ETV1P50549 477 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 PTPN5P54829 565 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 DSTNP60981 165 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 HSPB3Q12988 150 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 FLYWCH1Q4VC44 716 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 SLCO4C1Q6ZQN7 724 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 NPAS4Q8IUM7 802 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 ATP6V1C2Q8NEY4 427 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 ZNF480Q8WV37 535 aa17.69■□□□□ 0.42
CHPF-201ENST00000243776 IRF2BPLQ9H1B7 796 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms