RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GPR3P46089 330 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 GABRA4P48169 554 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CDK9P50750 372 aaKnown RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 MAP7Q14244 749 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PRTGQ2VWP7 1150 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 HLA-BQ31612 363 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 WLSQ5T9L3 541 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 HMBOX1Q6NT76 420 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PRSS41Q7RTY9 318 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PDSS2Q86YH6 399 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 GATAD2AQ86YP4 633 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 SAP25Q8TEE9 199 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 FAM162AQ96A26 154 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CNRIP1Q96F85 164 aaPredicted RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 ZDHHC12Q96GR4 267 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CD180Q99467 661 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 NLNQ9BYT8 704 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 STARD5Q9NSY2 213 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 DCAF13Q9NV06 445 aaKnown RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PHF11Q9UIL8 331 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 DAPP1Q9UN19 280 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PCDH15Q96QU1 1955 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 USP34Q70CQ2 3546 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PEX1O43933 1283 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 GALR3O60755 368 aaPredicted RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 TNFRSF21O75509 655 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 ERAL1O75616 437 aaKnown RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 KRT75O95678 551 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 NR2F6P10588 404 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CHI3L1P36222 383 aaPredicted RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CRATP43155 626 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PPM1FP49593 454 aaPredicted RBP14.38□□□□□ -0.11
HDHD3-201ENST00000238379 LIM2P55344 173 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 HSPB3Q12988 150 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 VEZF1Q14119 521 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 ANGPTL8Q6UXH0 198 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 FAM86B1Q8N7N1 296 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 NCLNQ969V3 563 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 C10orf90Q96M02 699 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 SEPHS2Q99611 448 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 KLHL4Q9C0H6 718 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 CHRNA10Q9GZZ6 450 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 EPB41L1Q9H4G0 881 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 PADI4Q9UM07 663 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 SNX8Q9Y5X2 465 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 V9GYQ6 96 aa14.38□□□□□ -0.11
HDHD3-201ENST00000238379 RNF103-CHMP3A0A140T963 221 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF860A6NHJ4 632 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 B4GALT2O60909 372 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 CFIP05156 583 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ETFAP13804 333 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 HOXD12P35452 270 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 BUD31P41223 144 aaPredicted RBP14.37□□□□□ -0.11
HDHD3-201ENST00000238379 CASP9P55211 416 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 CFHR1Q03591 330 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 DUSP2Q05923 314 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 VAC14Q08AM6 782 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 FADDQ13158 208 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
HDHD3-201ENST00000238379 CEBPEQ15744 281 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF750Q32MQ0 723 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 SAXO2Q658L1 398 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ENPP6Q6UWR7 440 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 AMIGO2Q86SJ2 522 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 RNF130Q86XS8 419 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 DNAJC9Q8WXX5 260 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 NEURL3Q96EH8 262 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 AHCYL2Q96HN2 611 aaKnown RBP14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF681Q96N22 645 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ZNF285Q96NJ3 590 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 BBS4Q96RK4 519 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 CAPN10Q9HC96 672 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 LYRM4Q9HD34 91 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 AGPAT4Q9NRZ5 378 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 OLAHQ9NV23 265 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 MS4A12Q9NXJ0 267 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 RAPGEFL1Q9UHV5 662 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 NAALAD2Q9Y3Q0 740 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 MAP4K5Q9Y4K4 846 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 ASXL3Q9C0F0 2248 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 TTC28Q96AY4 2481 aa14.37□□□□□ -0.11
HDHD3-201ENST00000238379 A0A1W2PS29 197 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 TXNDC9O14530 226 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 TPST1O60507 370 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 CPN2P22792 545 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 NTSP30990 170 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDHD3-201ENST00000238379 OLR1P78380 273 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 GPLD1P80108 840 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 NKG7Q16617 165 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ZBTB44Q8NCP5 570 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 ADCY4Q8NFM4 1077 aa14.36□□□□□ -0.11
HDHD3-201ENST00000238379 OR4C6Q8NH72 309 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms