RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GPR83Q9NYM4 423 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF225Q9UK10 706 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF451Q9Y4E5 1061 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 MED13Q9UHV7 2174 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TMEM114B3SHH9 223 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 C4orf51C9J302 202 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 SLC28A1O00337 649 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 CYR61O00622 381 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 AZIN1O14977 448 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 RGS14O43566 566 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 CEACAM4O75871 244 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 MYO1DO94832 1006 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 SERPINE1P05121 402 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 SERPINA7P05543 415 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 UQCRHP07919 91 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FGF4P08620 206 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FAM58BPP0C7Q3 252 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 COX6A1P12074 109 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 BSGP35613 385 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 GSTM5P46439 218 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 MAPK12P53778 367 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FOXL2P58012 376 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TRA2BP62995 288 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 SNRPNP63162 240 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 EEF1A2Q05639 463 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ACSM2AQ08AH3 577 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 UBAP2LQ14157 1087 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 MYBPC3Q14896 1274 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 LACTB2Q53H82 288 aaPredicted RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 VWA5B1Q5TIE3 1220 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 AGAP7PQ5VUJ5 663 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 CPZQ66K79 652 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ACSM2BQ68CK6 577 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TCTN3Q6NUS6 607 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF793Q6ZN11 406 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ANKRD37Q7Z713 158 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TRIM42Q8IWZ5 723 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 CLYBLQ8N0X4 340 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FAM47BQ8NA70 645 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 C8orf44Q96CB5 159 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ABHD17AQ96GS6 310 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 AGAP4Q96P64 663 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 PAIP2Q9BPZ3 127 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 MAPKAP1Q9BPZ7 522 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FAIM2Q9BWQ8 316 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 RPF2Q9H7B2 306 aaKnown RBP10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF160Q9HCG1 818 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 KCMF1Q9P0J7 381 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 C5AR2Q9P296 337 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TEKT2Q9UIF3 430 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 FBXW2Q9UKT8 454 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 TIMM22Q9Y584 194 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 ICE1Q9Y2F5 2266 aa10.59□□□□□ -0.71
SF3B6-201ENST00000233468 A0A0A6YYD5 115 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 A0A1B0GTL3 188 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TMEM120BA0PK00 339 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 A6NL46 340 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 FAM227AF5H4B4 570 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 UBFD1O14562 309 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PROM1O43490 865 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 DNAJB6O75190 326 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 RSL1D1O76021 490 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 ETHE1O95571 254 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 KLK1P06870 262 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 NR2F6P10588 404 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 COX7A2P14406 83 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 CASRP41180 1078 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TAS2R50P59544 299 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PRR20EP86478 221 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PRR20CP86479 221 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PRR20DP86480 221 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PRR20BP86481 221 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PRR20AP86496 221 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TNFRSF17Q02223 184 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 CHAF1BQ13112 559 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TERF2Q15554 542 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 SFT2D3Q587I9 215 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 ARL13AQ5H913 290 aaPredicted RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 SPDYAQ5MJ70 313 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PLAG1Q6DJT9 500 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 RNF165Q6ZSG1 346 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 COMMD6Q7Z4G1 85 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TRIM46Q7Z4K8 759 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 SCUBE1Q8IWY4 988 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TMEM132CQ8N3T6 1108 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 RNF175Q8N4F7 328 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 ANKRD42Q8N9B4 389 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 FAM76AQ8TAV0 307 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 M1APQ8TC57 530 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 DAZLQ92904 295 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TLCD1Q96CP7 247 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PELOQ9BRX2 385 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 MECRQ9BV79 373 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 MRPL1Q9BYD6 325 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 TRIM55Q9BYV6 548 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 FARSBQ9NSD9 589 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PSME2Q9UL46 239 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
SF3B6-201ENST00000233468 PCM1Q15154 2024 aa10.58□□□□□ -0.72
SF3B6-201ENST00000233468 SPTAN1Q13813 2472 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms