RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MLLT10P55197 1068 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 LCP2Q13094 533 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 MFAP5Q13361 173 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 IGFBP7Q16270 282 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 AP5B1Q2VPB7 878 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF468Q5VIY5 522 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-201ENST00000230480 LINC00696Q6ZRV3 163 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.36
VEGFA-201ENST00000230480 RDH11Q8TC12 318 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 M1APQ8TC57 530 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 METTL21AQ8WXB1 218 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 FAM111AQ96PZ2 611 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 LMF1Q96S06 567 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
VEGFA-201ENST00000230480 TRIM4Q9C037 500 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 TUBB1Q9H4B7 451 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 VTI1BQ9UEU0 232 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 CES1P1Q9UKY3 287 aa12.83□□□□□ -0.36
VEGFA-201ENST00000230480 LRRK2Q5S007 2527 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 SAGE2PA6NJ88 616 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 AIFM1O95831 613 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 DDAH2O95865 285 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 CLPSP04118 112 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 CHRNGP07510 517 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 DHRS4L1P0CG22 281 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 JAK1P23458 1154 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 SSR2P43308 183 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 PKNOX1P55347 436 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 TLE1Q04724 770 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 DUSP2Q05923 314 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 BTBD16Q32M84 506 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 ISLR2Q6UXK2 745 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 COMMD6Q7Z4G1 85 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 GPR180Q86V85 440 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 CRLF3Q8IUI8 442 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 CNPY4Q8N129 248 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 CCNYL1Q8N7R7 359 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 DOK4Q8TEW6 326 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 REPS1Q96D71 796 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 APIPQ96GX9 242 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 AGAP4Q96P64 663 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 SERPINI1Q99574 410 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 ALOXE3Q9BYJ1 711 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 SLC29A3Q9BZD2 475 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 SHCBP1LQ9BZQ2 653 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-201ENST00000230480 MID1IP1Q9NPA3 183 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 MED4Q9NPJ6 270 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 ADAM21Q9UKJ8 722 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 EXO1Q9UQ84 846 aaKnown RBP12.82□□□□□ -0.36
VEGFA-201ENST00000230480 HEMK1Q9Y5R4 338 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-201ENST00000230480 PTGDR2Q9Y5Y4 395 aa12.82□□□□□ -0.36
VEGFA-201ENST00000230480 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 SLC28A2O43868 658 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 WDPCPO95876 746 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 F10P00742 488 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 KLK1P06870 262 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 FAM58BPP0C7Q3 252 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 SKP1P63208 163 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 HMGCS1Q01581 520 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 SRSF1Q07955 248 aaKnown RBP eCLIP12.81□□□□□ -0.361e-7■■□□□ 13.5
VEGFA-201ENST00000230480 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 KIAA0040Q15053 153 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 ZNF750Q32MQ0 723 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 LIPMQ5VYY2 423 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 C16orf47Q6ZP98 133 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-201ENST00000230480 Q6ZSR9 355 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 TEX19Q8NA77 164 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 OR2T11Q8NH01 316 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.81□□□□□ -0.362e-10■■■■■ 37.7
VEGFA-201ENST00000230480 DNAJB14Q8TBM8 379 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 METTL6Q8TCB7 284 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 PPP4R1Q8TF05 950 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 SELENOMQ8WWX9 145 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 HAS2Q92819 552 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 PNPLA2Q96AD5 504 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 LPAR4Q99677 370 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 ROGDIQ9GZN7 287 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 BRF2Q9HAW0 419 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 C19orf25Q9UFG5 118 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-201ENST00000230480 PCDHGA10Q9Y5H3 936 aa12.81□□□□□ -0.36
VEGFA-201ENST00000230480 NUP214P35658 2090 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-201ENST00000230480 TMEM233B4DJY2 109 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 PSMD12O00232 456 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-201ENST00000230480 DPM1O60762 260 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 TRIM13O60858 407 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 MLYCDO95822 493 aa12.8□□□□□ -0.36
VEGFA-201ENST00000230480 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms