RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TIGD5Q53EQ6 642 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SFRP4Q6FHJ7 346 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 WASH2PQ6VEQ5 465 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SNIP1Q8TAD8 396 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 MZB1Q8WU39 189 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 NLGN3Q9NZ94 848 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CFAP97Q9P2B7 532 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 MRPS33Q9Y291 106 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 NUBP2Q9Y5Y2 271 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 JUNBP17275 347 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 MAPK3P27361 379 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CLDN10P78369 228 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ZNF763Q0D2J5 394 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 PON3Q15166 354 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 TBCEQ15813 527 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 FOXRED2Q8IWF2 684 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 OR51J1Q9H342 316 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 FBXL3Q9UKT7 428 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CTDSP2O14595 271 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 JRKO75564 520 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 KRT33AO76009 404 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 FHP07954 510 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 RAB3BP20337 219 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 HK3P52790 923 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 RPS24P62847 133 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SEMG2Q02383 582 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 TMEM69Q5SWH9 247 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 PLAG1Q6DJT9 500 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SAMD14Q8IZD0 417 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SGCDQ92629 289 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SMOQ99835 787 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 BAZ2AQ9UIF9 1905 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 TBX18O95935 607 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CSNK2A2P19784 350 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 GGT2P36268 569 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 MAVSQ7Z434 540 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 RIT1Q92963 219 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ERVK-19Q9WJR5 959 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 DOT1LQ8TEK3 1739 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ZNF670-ZNF695F2Z2N8 137 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 PSMD9O00233 223 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ALX3O95076 343 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 IFNA21P01568 189 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 GBAP04062 536 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 JUNP05412 331 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CDKN2CP42773 168 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 MLLT1Q03111 559 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 FGL1Q08830 312 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ESCO2Q56NI9 601 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 ELP2Q6IA86 826 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 POMZP3Q6PJE2 187 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 CELF2-AS1Q8N7Q2 184 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 OR8S1Q8NH09 359 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 TMEM248Q9NWD8 314 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 A6NL46 340 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 C1orf196B1AJZ1 125 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 RASGRP1O95267 797 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 TFP02787 698 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 UQCRC2P22695 453 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 FOXA1P55317 472 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 GK2Q14410 553 aaPredicted RBP13.25□□□□□ -0.29
HCFC2-201ENST00000229330 GTDC1Q4AE62 458 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 LYSMD2Q8IV50 215 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 CASTOR1Q8WTX7 329 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 TMEM168Q9H0V1 697 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 PPM1BO75688 479 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ADAP00813 363 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 DRD5P21918 477 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 SOX3P41225 446 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 VLDLRP98155 873 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ZMYND11Q15326 602 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 FUT10Q6P4F1 479 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 RAB8BQ92930 207 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 SLC2A13Q96QE2 648 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 CTRCQ99895 268 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 CACNG2Q9Y698 323 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 RENP00797 406 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 GTF2F2P13984 249 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 LAG3P18627 525 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 BMP8BP34820 402 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 PRMT2P55345 433 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 ERVK-25P63136 954 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 PUM1Q14671 1186 aaKnown RBP eCLIP13.25□□□□□ -0.29
HCFC2-201ENST00000229330 PYHIN1Q6K0P9 492 aa13.25□□□□□ -0.29
HCFC2-201ENST00000229330 BMP8AQ7Z5Y6 402 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms