RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CNOT2Q9NZN8 540 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 DUSP12Q9UNI6 340 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ITM2BQ9Y287 266 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 FAM32AQ9Y421 112 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 TOR1BO14657 336 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ADAM23O75077 832 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 C6orf47O95873 294 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 RPLP0P05388 317 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 RHCEP18577 417 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ALDH9A1P49189 494 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 LSM3P62310 102 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 CDC20Q12834 499 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 IRF3Q14653 427 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 CST6Q15828 149 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 KIAA1211LQ6NV74 962 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 PAGE2Q7Z2X7 111 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 BTLAQ7Z6A9 289 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 RHNO1Q9BSD3 238 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 DPEP2Q9H4A9 486 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 SP140LQ9H930 580 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 DOLKQ9UPQ8 538 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 KLK4Q9Y5K2 254 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ENPP4Q9Y6X5 453 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 MYO10Q9HD67 2058 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 EFCAB10A6NFE3 127 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 METTL15A6NJ78 407 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 M0R082 166 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 PI15O43692 258 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 AQP1P29972 269 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 COX20Q5RI15 118 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 LRRC56Q8IYG6 542 aaPredicted RBP23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 PRM3Q9NNZ6 103 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 ITGB1BP2Q9UKP3 347 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 F5P12259 2224 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 PRUNE2Q8WUY3 3088 aa23.74■■□□□ 1.39
RUNDC3A-201ENST00000225441 LILRB5O75023 590 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ADH1BP00325 375 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 VIPP01282 170 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 HOXB2P14652 356 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 UQCRC2P22695 453 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 PDHA2P29803 388 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CHI3L1P36222 383 aaPredicted RBP23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 LIPAP38571 399 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 P2RY2P41231 377 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CDH12P55289 794 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CNTN1Q12860 1018 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 MLF2Q15773 248 aaPredicted RBP23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF181Q2M3W8 571 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF776Q68DI1 518 aaPredicted RBP23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF367Q7RTV3 350 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 NFKBIDQ8NI38 313 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 PSMA8Q8TAA3 256 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 FBRSQ9HAH7 460 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 FAM8A1Q9UBU6 413 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 TMEM247A6NEH6 219 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 MID1O15344 667 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CCNB2O95067 398 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CDC42P60953 191 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CCINQ13939 588 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 EXOC3L2Q2M3D2 409 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 TMEM236Q5W0B7 351 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ADNP2Q6IQ32 1131 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ANGPTL8Q6UXH0 198 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 OR4K1Q8NGD4 311 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF675Q8TD23 568 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 RAB7BQ96AH8 199 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CDCA4Q9BXL8 241 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CPNE5Q9HCH3 593 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 CCDC177Q9NQR7 707 aaPredicted RBP23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ACER3Q9NUN7 267 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 IMPAD1Q9NX62 359 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF226Q9NYT6 803 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 GULP1Q9UBP9 304 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 GPR34Q9UPC5 381 aa23.73■■□□□ 1.39
RUNDC3A-201ENST00000225441 A0A1W2PQF6 199 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 A0A1W2PRB8 838 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 MAN2B1O00754 1011 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 SEMA3DO95025 777 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 COL9A1P20849 921 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 C5AR1P21730 350 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 CD72P21854 359 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 ALDH4A1P30038 563 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 DRD3P35462 400 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 GSTM5P46439 218 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF45Q02386 682 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 TAP2Q03519 686 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 CATSPEREQ5SY80 951 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 LCTLQ6UWM7 567 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 CACUL1Q86Y37 369 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 KRT78Q8N1N4 520 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 STX19Q8N4C7 294 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 LILRA3Q8N6C8 439 aaPredicted RBP23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 TMEM184CQ9NVA4 438 aa23.72■■□□□ 1.39
RUNDC3A-201ENST00000225441 CBLP22681 906 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 SERPINB1P30740 379 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 SLC19A1P41440 591 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 MAGEA8P43361 318 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 IFITM3Q01628 133 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZP2Q05996 745 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms