RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ISL1P61371 349 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 OR4N5Q8IXE1 308 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 BHLHE41Q9C0J9 482 aaPredicted RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 RBM38Q9H0Z9 239 aaKnown RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 OR51V1Q9H2C8 321 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 SYNDIG1Q9H7V2 258 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 RPS6KB2Q9UBS0 482 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 ENPP5Q9UJA9 477 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 GTF2A1LQ9UNN4 478 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 SATB2Q9UPW6 733 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 MIA3Q5JRA6 1907 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 GAPDHSO14556 408 aaPredicted RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 CYP17A1P05093 508 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 CSNK2A2P19784 350 aaPredicted RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 UQCRC2P22695 453 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 CPN2P22792 545 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 CMPK1P30085 196 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 PROX2Q3B8N5 592 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 ZNF311Q5JNZ3 666 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 UBTD2Q8WUN7 234 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 KLHL6Q8WZ60 621 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 OTUB2Q96DC9 234 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 MBOAT4Q96T53 435 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
RAB3D-201ENST00000222120 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
RAB3D-201ENST00000222120 ANKRD28O15084 1053 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 GMFGO60234 142 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 ARL4DP49703 201 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 MRPL28Q13084 256 aaKnown RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 FADDQ13158 208 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 TOR1AIP1Q5JTV8 583 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 LIPKQ5VXJ0 399 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 METTL2BQ6P1Q9 378 aaKnown RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 Q6ZNB5 142 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 SIX5Q8N196 739 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 RERGQ96A58 199 aaPredicted RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 SH3YL1Q96HL8 342 aaPredicted RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 LRIG1Q96JA1 1093 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 DMRTB1Q96MA1 342 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 DPH7Q9BTV6 452 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 CXXC1Q9P0U4 656 aaPredicted RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 HSFX1Q9UBD0 423 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 C1QCP02747 245 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 CD97P48960 835 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PRLHRP49683 370 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 SLAMF1Q13291 335 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 VEZF1Q14119 521 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 GINS1Q14691 196 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 SLCO4C1Q6ZQN7 724 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 ZFP41Q8N8Y5 198 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 ZBP1Q9H171 429 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 TIGARQ9NQ88 270 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 TRBV5-4A0A0C4DH59 114 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 LAMP2P13473 410 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 CRISP1P54107 249 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 DPPA4Q7L190 304 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 SHFQ7M4L6 423 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 OR52L1Q8NGH7 329 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PHF21AQ96BD5 680 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PCBD2Q9H0N5 130 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 OR51I1Q9H343 314 aa12.96□□□□□ -0.33
RAB3D-201ENST00000222120 KRCC1Q9NPI7 259 aaPredicted RBP12.96□□□□□ -0.33
RAB3D-201ENST00000222120 PIKFYVEQ9Y2I7 2098 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.34
RAB3D-201ENST00000222120 KMOO15229 486 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 KAT7O95251 611 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 IFNA16P05015 189 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 CSTF2P33240 577 aaKnown RBP eCLIP12.96□□□□□ -0.34
RAB3D-201ENST00000222120 TALDO1P37837 337 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 COPZ1P61923 177 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 LRRC26Q2I0M4 334 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 ADIPOR2Q86V24 386 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 FAM46DQ8NEK8 389 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.96□□□□□ -0.34
RAB3D-201ENST00000222120 NMNAT1Q9HAN9 279 aaPredicted RBP12.96□□□□□ -0.34
RAB3D-201ENST00000222120 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 ACOT13Q9NPJ3 140 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 RLIMQ9NVW2 624 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 PEX16Q9Y5Y5 336 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 SEC16AO15027 2179 aa12.96□□□□□ -0.34
RAB3D-201ENST00000222120 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 UGDHO60701 494 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 ITIH1P19827 911 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 MPIP34949 423 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 ITGA1P56199 1179 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 HOXC5Q00444 222 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 RBBP4Q09028 425 aa12.95□□□□□ -0.34
RAB3D-201ENST00000222120 SLC35F1Q5T1Q4 408 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms