RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 AARSD1Q9BTE6 412 aaKnown RBP13.04□□□□□ -0.32
GABPB1-201ENST00000220429 PLXNA4Q9HCM2 1894 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 C2orf78A6NCI8 922 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 LALBAP00709 142 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 APOC3P02656 99 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 LHCGRP22888 699 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 S100PP25815 95 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 CSNK2BP67870 215 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 NFKB2Q00653 900 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 OR4D1Q15615 310 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 UNC50Q53HI1 259 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 OR4K2Q8NGD2 314 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 DNASE1L2Q92874 299 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 EXT2Q93063 718 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF436Q9C0F3 470 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ACTR8Q9H981 624 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 NIT2Q9NQR4 276 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 GIMAP2Q9UG22 337 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 PCDHGA2Q9Y5H1 932 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 COL4A6Q14031 1691 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ASPDHA6ND91 283 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 DBX1A6NMT0 343 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 F11P03951 625 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 FAM157BP0CG42 384 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 SMSP52788 366 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF177Q13360 481 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ADGRF1Q5T601 910 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 LUZP2Q86TE4 346 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 C19orf18Q8NEA5 215 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 LPCAT1Q8NF37 534 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ZDHHC12Q96GR4 267 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 MED18Q9BUE0 208 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 EMC7Q9NPA0 242 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 SDR39U1Q9NRG7 319 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 HCN3Q9P1Z3 774 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF222Q9UK12 451 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 MED16Q9Y2X0 877 aa13.03□□□□□ -0.32
GABPB1-201ENST00000220429 DNMT3AQ9Y6K1 912 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-201ENST00000220429 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 ABLIM3O94929 683 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 CD160O95971 181 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 S100A9P06702 114 aaKnown RBP13.02□□□□□ -0.32
GABPB1-201ENST00000220429 PRKAR1AP10644 381 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.32
GABPB1-201ENST00000220429 POU3F4P49335 361 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 HNMTP50135 292 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 RORCP51449 518 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 OR7E24Q6IFN5 339 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 GLT6D1Q7Z4J2 308 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 PAQR7Q86WK9 346 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 NKAIN4Q8IVV8 208 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 GPR156Q8NFN8 814 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF461Q8TAF7 563 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.32
GABPB1-201ENST00000220429 MTERF3Q96E29 417 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 COQ10AQ96MF6 247 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 TRMOQ9BU70 441 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 PTDSS2Q9BVG9 487 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 ASPNQ9BXN1 380 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 MED28Q9H204 178 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 BRD9Q9H8M2 597 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 FOLH1BQ9HBA9 442 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 POPDC3Q9HBV1 291 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.32
GABPB1-201ENST00000220429 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 TMEM82A0PJX8 343 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 STMND1H3BQB6 276 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 SLC28A1O00337 649 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 MTHFD2P13995 350 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 GGT1P19440 569 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 CRISP3P54108 245 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 ARF5P84085 180 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 HFEQ30201 348 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 RNF219Q5W0B1 726 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 RAB11FIP2Q7L804 512 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 ZNF655Q8N720 491 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 OR1M1Q8NGA1 313 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.338e-8■■■■■ 31.5
GABPB1-201ENST00000220429 TSPEARQ8WU66 669 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 EDARADDQ8WWZ3 215 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 ZBED6CLQ96FA7 236 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
GABPB1-201ENST00000220429 ERVK-6Q9BXR3 956 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 YIPF1Q9Y548 306 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 OBSL1O75147 1896 aa13.02□□□□□ -0.33
GABPB1-201ENST00000220429 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms