RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 GLIPR2Q9H4G4 154 aa16.33■□□□□ 0.21
RABGGTA-201ENST00000216840 BAG5Q9UL15 447 aa16.33■□□□□ 0.21
RABGGTA-201ENST00000216840 MRPS17Q9Y2R5 130 aaKnown RBP16.33■□□□□ 0.21
RABGGTA-201ENST00000216840 PGRMC2O15173 223 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CTSVO60911 334 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 GUCY1B2O75343 617 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 AIFM1O95831 613 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 OPN1SWP03999 348 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CTSEP14091 401 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 ATP6V1B1P15313 513 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 RPL5P46777 297 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 ITGA1P56199 1179 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 PCBP3P57721 371 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 RPS26P62854 115 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 SPDYE7PQ495Y7 208 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CRB2Q5IJ48 1285 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 TTC33Q6PID6 262 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 FIGLAQ6QHK4 219 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CEACAM20Q6UY09 585 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CEP68Q76N32 757 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 TSPAN14Q8NG11 270 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 GAL3ST3Q96A11 431 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 TM4SF19Q96DZ7 209 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 AMDHD1Q96NU7 426 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 TRAPPC9Q96Q05 1148 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 OR2A5Q96R48 311 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 MBOAT4Q96T53 435 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 BARD1Q99728 777 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 FOXQ1Q9C009 403 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 GABARAPL1Q9H0R8 117 aa16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 CLK4Q9HAZ1 481 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-201ENST00000216840 FAM221BA6H8Z2 402 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 FAM170BA6NMN3 283 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 M0QX08 132 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 SEC24DO94855 1032 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 RGS1Q08116 209 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 TGM3Q08188 693 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 C1orf61Q13536 156 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 TMEM26Q6ZUK4 368 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 DGLUCYQ7Z3D6 616 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 PARGQ86W56 976 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 SLC30A8Q8IWU4 369 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 TMEFF2Q9UIK5 374 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 PILRAQ9UKJ1 303 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 CES1P1Q9UKY3 287 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 ANGPT4Q9Y264 503 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 PADI2Q9Y2J8 665 aa16.32■□□□□ 0.2
RABGGTA-201ENST00000216840 MYO1GB0I1T2 1018 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 HS6ST1O60243 411 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 PABPC4LP0CB38 370 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 ZNF888P0CJ79 500 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 LSSP48449 732 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 CCT3P49368 545 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 SNRPNP63162 240 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 BTN3A2P78410 334 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 EPS8Q12929 822 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 C18orf63Q68DL7 685 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 TNFAIP8L2Q6P589 184 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 TSEN54Q7Z6J9 526 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 SATL1Q86VE3 508 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 ZNF786Q8N393 782 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 DEFB119Q8N690 84 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 METTL25Q8N6Q8 603 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 ARL10Q8N8L6 244 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 FAM174AQ8TBP5 190 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 UTP15Q8TED0 518 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 A4GALTQ9NPC4 353 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 EVA1BQ9NVM1 165 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 FAM118AQ9NWS6 357 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 KLK4Q9Y5K2 254 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 ENTPD2Q9Y5L3 495 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 TRIOO75962 3097 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 A0A0J9YVX5 310 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 C2orf74A8MZ97 194 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 P2RX6O15547 441 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 PROM1O43490 865 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 DPM1O60762 260 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 FPR1P21462 350 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 NTSP30990 170 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 PXNP49023 591 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 BLKP51451 505 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 NCBP2P52298 156 aaKnown RBP eCLIP16.31■□□□□ 0.21e-10■■■□□ 14.8
RABGGTA-201ENST00000216840 STARD6P59095 220 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 KCTD21Q4G0X4 260 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 MUS81Q96NY9 551 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 BBS4Q96RK4 519 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 MAPKAP1Q9BPZ7 522 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 AMBRA1Q9C0C7 1298 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 KLHL25Q9H0H3 589 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 LYARQ9NX58 379 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
RABGGTA-201ENST00000216840 KNL1Q8NG31 2342 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 ERAL1O75616 437 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 WNT1P04628 370 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 SLC35G6P0C7Q6 338 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
RABGGTA-201ENST00000216840 IFI44LQ53G44 452 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms