RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRKCIP41743 596 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 DEFA6Q01524 100 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 PMS2P3Q13401 168 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 EEF1DP3Q658K8 133 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 XKR5Q6UX68 686 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 ZNF100Q8IYN0 542 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 CCDC71LQ8N9Z2 235 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 TAAR8Q969N4 342 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 SEC16AO15027 2179 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 ZNF821O75541 412 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 PFKLP17858 780 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 ACTR1BP42025 376 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 TGFBIQ15582 683 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 PAN3Q58A45 887 aaKnown RBP14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 CMTM7Q96FZ5 175 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 ZNF419Q96HQ0 510 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 CCDC32Q9BV29 185 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 SERTAD3Q9UJW9 196 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 PRKCGP05129 697 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 LIX1LQ8IVB5 337 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 RDH12Q96NR8 316 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 FKBPLQ9UIM3 349 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 FZD1Q9UP38 647 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 TMED5Q9Y3A6 229 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 ATG4BQ9Y4P1 393 aa14.09□□□□□ -0.15
SPTLC2-201ENST00000216484 CHEK1O14757 476 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 KNG1P01042 644 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 ESR1P03372 595 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 C3P1Q6ZMU1 363 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 METTL27Q8N6F8 245 aaPredicted RBP14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 OR2A12Q8NGT7 310 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 CYB5D2Q8WUJ1 264 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 FN3KRPQ9HA64 309 aa14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 EXOSC1Q9Y3B2 195 aaKnown RBP14.08□□□□□ -0.15
SPTLC2-201ENST00000216484 FAM237AA0A1B0GTK4 181 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC22A2O15244 555 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CDC123O75794 336 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 GLUD2P49448 558 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CAP1Q01518 475 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 LAPTM4AQ15012 233 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 OTOP2Q7RTS6 562 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 WDR53Q7Z5U6 358 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 TRAM1L1Q8N609 369 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 PLD5Q8N7P1 536 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 GTF2IRD1Q9UHL9 959 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 NAALAD2Q9Y3Q0 740 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 MATN3O15232 486 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 GAS6Q14393 721 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 MYLK3Q32MK0 819 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 ZNF829Q3KNS6 432 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 KCNIP4Q6PIL6 250 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 NTAN1Q96AB6 310 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 WDR26Q9H7D7 661 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 MEPEQ9NQ76 525 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 FNIP2Q9P278 1114 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 SVILO95425 2214 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 RETP07949 1114 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CKMT1AP12532 417 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CLCNKAP51800 687 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 MC2RQ01718 297 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 IQSEC2Q5JU85 1478 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CREB3L2Q70SY1 520 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 OR1S1Q8NH92 325 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CPXM1Q96SM3 734 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 LHX5Q9H2C1 402 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 GOLGA2P5Q9HBQ8 144 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 KCNJ16Q9NPI9 418 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 ABCB7O75027 752 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CST9LP1Q5W188 147 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 MFSD5Q6N075 450 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 THAP3Q8WTV1 239 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 RSPRY1Q96DX4 576 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CYP2S1Q96SQ9 504 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 PLAGL1Q9UM63 463 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 SOCS2O14508 198 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 BRCC3P46736 316 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 DHPSP49366 369 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 DGKQP52824 942 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 CDK6Q00534 326 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 ANKRD54Q6NXT1 300 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 C3orf49Q96BT1 292 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 RXFP3Q9NSD7 469 aa14.08□□□□□ -0.16
SPTLC2-201ENST00000216484 SC5DO75845 299 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 RHOQP17081 205 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SLC2A5P22732 501 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 CDONQ4KMG0 1287 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 OR4F3Q6IEY1 312 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MON1BQ7L1V2 547 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 ASRGL1Q7L266 308 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 WDR20Q8TBZ3 569 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MITD1Q8WV92 249 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 TM9SF4Q92544 642 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SECISBP2Q96T21 854 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 SYT3Q9BQG1 590 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 MRI1Q9BV20 369 aa14.07□□□□□ -0.16
SPTLC2-201ENST00000216484 LPLP06858 475 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms