RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 PPP1CAP62136 330 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 ILF2Q12905 390 aaKnown RBP10.78□□□□□ -0.68
CDKL1-201ENST00000216378 UBE2UQ5VVX9 321 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SPPL2CQ8IUH8 684 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SYTL1Q8IYJ3 562 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 ARL14Q8N4G2 192 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 OXR1Q8N573 874 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 GPR156Q8NFN8 814 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 TSPAN14Q8NG11 270 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 LRRC58Q96CX6 371 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 RNF31Q96EP0 1072 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 CNDP2Q96KP4 475 aaKnown RBP10.78□□□□□ -0.68
CDKL1-201ENST00000216378 DOK1Q99704 481 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 ELOVL6Q9H5J4 265 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SPAG4Q9NPE6 437 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 DTNAQ9Y4J8 743 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 MATN4O95460 622 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 C8GP07360 202 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SLC6A2P23975 617 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SLC6A12P48065 614 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 BLKP51451 505 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 OLR1P78380 273 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 IRF8Q02556 426 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 CFHR1Q03591 330 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 GTF2H3Q13889 308 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 DOC2AQ14183 400 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 FAM174BQ3ZCQ3 159 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SPANXN4Q5MJ08 99 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 FAM9CQ8IZT9 166 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 ZNF740Q8NDX6 193 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 AURKBQ96GD4 344 aaPredicted RBP10.78□□□□□ -0.68
CDKL1-201ENST00000216378 LRGUKQ96M69 825 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SERPINI1Q99574 410 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 PKP2Q99959 881 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 OR52A5Q9H2C5 316 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 SPNS1Q9H2V7 528 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 LRTM1Q9HBL6 345 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 NLGN3Q9NZ94 848 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 TMEM9Q9P0T7 183 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 TMEM181Q9P2C4 612 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 PRPF19Q9UMS4 504 aaKnown RBP10.78□□□□□ -0.68
CDKL1-201ENST00000216378 BOD1L1Q8NFC6 3051 aa10.78□□□□□ -0.68
CDKL1-201ENST00000216378 PCM1Q15154 2024 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 KCNE1BA0A087WTH5 132 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 FAM149AA5PLN7 773 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 IFRD1O00458 451 aaPredicted RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 SLC30A4O14863 429 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 ATE1O95260 518 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 EBLN1P0CF75 366 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 ZNF883P0CG24 379 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 MPC1LP0DKB6 136 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 RRM2P31350 389 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 GRIA3P42263 894 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 GRK6P43250 576 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 NOVA1P51513 510 aaKnown RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 OR1D5P58170 312 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 GK3PQ14409 553 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 TRIP6Q15654 476 aaKnown RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 GRAMD1BQ3KR37 738 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 FAM180BQ6P0A1 224 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 SPATA19Q7Z5L4 167 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 AKAP14Q86UN6 197 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 SIMC1Q8NDZ2 872 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 NETO1Q8TDF5 533 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 UBTD2Q8WUN7 234 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 ZNF480Q8WV37 535 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 NEIL2Q969S2 332 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 SH3KBP1Q96B97 665 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 OMA1Q96E52 524 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 NTMT1Q9BV86 223 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 GSDMCQ9BYG8 508 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 TRIM15Q9C019 465 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 IMP3Q9NV31 184 aaKnown RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 MRPL39Q9NYK5 338 aaKnown RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 CD300AQ9UGN4 299 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.68
CDKL1-201ENST00000216378 VPS4AQ9UN37 437 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 AP4B1Q9Y6B7 739 aa10.77□□□□□ -0.68
CDKL1-201ENST00000216378 A0A1W2PP18 115 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 TMX2-CTNND1H3BSU7 103 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 ANKRD28O15084 1053 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 DFNA5O60443 496 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
CDKL1-201ENST00000216378 C1orf105O95561 183 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 BCKDHAP12694 445 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 PSMB5P28074 263 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 ATP4BP51164 291 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 S100A12P80511 92 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 SIM1P81133 766 aaPredicted RBP10.77□□□□□ -0.69
CDKL1-201ENST00000216378 RCAN2Q14206 197 aa10.77□□□□□ -0.69
CDKL1-201ENST00000216378 TRIM25Q14258 630 aaKnown RBP10.77□□□□□ -0.69
CDKL1-201ENST00000216378 PGS1Q32NB8 556 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms