RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ntmt1Q8R2U4 223 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Asb8Q91ZT9 288 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 SncbQ91ZZ3 133 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 TympQ99N42 471 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rps21Q9CQR2 83 aaKnown RBP9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pop5Q9DB28 169 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 B4galt2Q9Z2Y2 369 aa9.43□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fndc7A2AED3 737 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc43a3A2AVZ9 502 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 P18533 117 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rab21P35282 222 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 MtpnP62774 118 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Epha4Q03137 986 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Atp5a1Q03265 553 aaKnown RBP9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc30a9Q5IRJ6 567 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 9930111J21Rik1Q5SVP0 844 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tmem62Q8BXJ9 643 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rgs8Q8BXT1 180 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Slc5a8Q8BYF6 611 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gpr157Q8C206 330 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Iglon5Q8HW98 336 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 N4bp2l2Q8JZS6 575 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pcdhb16Q91Y03 802 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Arrb2Q91YI4 410 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Zswim1Q9CWV7 455 aaKnown RBP9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Igkv6-32A0A140T8N9 115 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Zcchc7B1AX39 541 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vsig10lD3YZF7 868 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Trim55G3X8Y1 545 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gm20878L7N244 103 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Npc1O35604 1277 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 ApodP51910 189 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ica1lQ3TY65 431 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 TepsinQ3U3N6 573 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Alg10bQ3UGP8 474 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 H2-Eb2Q3UUV9 287 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Flrt2Q8BLU0 660 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Serpina11Q8CIE0 424 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Plxnb1Q8CJH3 2119 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pcdhga4Q91XY4 930 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Oosp1Q925U0 202 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tmem186Q9CR76 216 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Trmt5Q9D0C4 501 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Akr1e2Q9DCT1 301 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 ScelQ9EQG3 652 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Myo1cQ9WTI7 1063 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 6330409D20RikA2AK85 162 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ccdc62E9PVD1 701 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr237-ps1K9J725 310 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf143O70230 638 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Stat6P52633 837 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Psme3P61290 254 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Hnrnph2P70333 449 aaKnown RBP9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gm5431Q5NCB3 844 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Thoc6Q5U4D9 341 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Trpc1Q61056 793 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Znf574Q8BY46 900 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Map2k7Q8CE90 535 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Aoc1Q8JZQ5 751 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Trim31Q8R0K2 507 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Nsmce2Q91VT1 247 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pcdhga11Q91XY8 933 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Wbp11Q923D5 641 aaKnown RBP9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Abhd17aQ99JW1 310 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gmpr2Q99L27 348 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Q9CQM1 111 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vmn1r40Q9EQ46 310 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rdh11Q9QYF1 316 aa9.42□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 BptfA2A654 3036 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Klhl18A0A0G2JGN5 579 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Mc3rP33033 323 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Map3k7clP58500 142 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Pld2P97813 933 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 InhaQ04997 366 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Vac14Q80WQ2 782 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 UnkQ8BL48 810 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sdr9c7Q8K3P0 313 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tm6sf2Q8R1J1 378 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gtf2a1lQ8R4I4 468 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1512Q8VF72 313 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr689Q8VG18 320 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tmem35aQ9D328 167 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Gid8Q9D7M1 228 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 AvenQ9D9K3 342 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Tmem8aQ9ESN3 769 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fads3Q9JJE7 449 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Chst11Q9JME2 352 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fer1l4A3KGK3 1992 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Olfr1153A2AVC0 318 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 5430401F13RikE9Q328 175 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Il20rbE9Q9A6 308 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Cyp2j5O54749 501 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 AprtP08030 180 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Ckmt1P30275 418 aaKnown RBP9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 EpxP49290 716 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Fmo1P50285 532 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Stard6P59096 233 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Rbm44Q3V089 1013 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Sfmbt2Q5DTW2 938 aa9.41□□□□□ -0.9
Ccdc38-201ENSMUST00000092215 Serpinb1cQ5SV42 375 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms