RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ebna1bp2Q9D903 306 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 GabarapQ9DCD6 117 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Aldh6a1Q9EQ20 535 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tmeff2Q9QYM9 374 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r10W4VSP8 311 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Dock1Q8BUR4 1865 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mfsd13bA0A1L1SUA2 455 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Trgv2A2J008 116 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 H2-T24F8VQG4 363 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn2r111K7N674 857 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gfra2O08842 464 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lgals7O54974 136 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Yme1l1O88967 715 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 P01664 111 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cfl2P45591 166 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Opn1swP51491 346 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tbx5P70326 518 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cdk18Q04899 451 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 UnklQ5FWH2 727 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Serpinf2Q61247 491 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Kxd1Q80XH1 177 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gpc2Q8BKV1 579 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Fastkd3Q8BSN9 661 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Txnl4bQ8BUH1 149 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gulp1Q8K2A1 304 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 SelenomQ8VHC3 145 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bbox1Q924Y0 387 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mlf2Q99KX1 247 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rwdd2bQ99M03 290 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Col25a1Q99MQ5 666 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tex46Q9CPU3 165 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Creb3l4Q9D2A5 370 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Nek6Q9ES70 313 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gmeb1Q9JL60 562 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ramp2Q9WUP0 189 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 RttnQ8R4Y8 2226 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Igkv17-121A0A0G2JFA8 117 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm30302A0A1Y7VN40 1110 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ralgps1A2AR50 585 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gm14459A2BI73 179 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 2610021A01RikE9Q0Q3 834 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zfp949E9Q732 603 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Arfip1G5E8V9 373 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Socs5O54928 536 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tuba1bP05213 451 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 GcgP55095 180 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tbpl1P62340 186 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tuba1aP68369 451 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cry1P97784 606 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Prelid2Q0VBB0 177 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 PrtgQ2EY15 1191 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Trpc5osQ3UHV4 110 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Kbtbd8Q3UQV5 599 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Mup20Q5FW60 181 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Arhgef15Q5FWH6 849 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Xkr5Q5GH66 676 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Adam2Q60718 735 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cst13Q80ZN5 141 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Zcchc3Q8BPK2 400 aaKnown RBP9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Sdr9c7Q8K3P0 313 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Colec12Q8K4Q8 742 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cadm3Q99N28 396 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Ssr2Q9CPW5 183 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Desi1Q9CQT7 168 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 C1qtnf3Q9ES30 246 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Pole3Q9JKP7 145 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 H2-BlV9GXR0 257 aa9.33□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Syndig1A2ANU3 258 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr1303A2AVW1 312 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn2r115E9Q0E7 857 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tex16F6WNY1 1150 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc6a6O35316 621 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Bard1O70445 765 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 HbaP01942 142 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 CatP24270 527 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tia1P52912 386 aaKnown RBP9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 HccsP53702 272 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lman2lP59481 347 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Stox2Q499E5 926 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 C1orf109Q499E6 217 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Snta1Q61234 503 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gadl1Q80WP8 550 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Cpeb2Q812E0 521 aaKnown RBP9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc16a12Q8BGC3 486 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Larp4Q8BWW4 719 aaKnown RBP9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Crispld1Q8CGD2 500 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr811Q8VFI1 319 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Slc15a4Q91W98 574 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 AjubaQ91XC0 547 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Lrrc49Q91YK0 686 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Marc2Q922Q1 338 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Rprd1bQ9CSU0 326 aaKnown RBP9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 L3hypdhQ9CXA2 354 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Plpp6Q9D4F2 292 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Tvp23bQ9D8T4 205 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Prkar1aQ9DBC7 381 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Olfr287E9PZS7 322 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 FpgtG5E8F4 590 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Vmn1r16K7N775 303 aa9.32□□□□□ -0.92
Pcdh1-201ENSMUST00000057185 Gpr50O88495 591 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms