RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 KCNK10P57789 538 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 TNFRSF17Q02223 184 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 DSG2Q14126 1118 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 FAM174BQ3ZCQ3 159 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 R3HCC1LQ7Z5L2 792 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 TREML1Q86YW5 311 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 GLB1L3Q8NCI6 653 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 OR7A2PQ8NGA2 310 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 OR51Q1Q8NH59 317 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 PPCDCQ96CD2 204 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 GBP5Q96PP8 586 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 MAPRE3Q9UPY8 281 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 C1orf226A1L170 272 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 FAM234BA2RU67 622 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 CCT8L1PA6NM43 557 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 GABRR3A8MPY1 467 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 FAM227AF5H4B4 570 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 FURINP09958 794 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 DRD2P14416 443 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 RPL3P39023 403 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 XCR1P46094 333 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 ACTN3Q08043 901 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 TMPRSS7Q7RTY8 843 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 TICAM1Q8IUC6 712 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 FUNDC1Q8IVP5 155 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 RIMKLAQ8IXN7 391 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 UCN3Q969E3 161 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 CLMPQ9H6B4 373 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 CLK4Q9HAZ1 481 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 EXO1Q9UQ84 846 aaKnown RBP16.5■□□□□ 0.23
PHGDH-230ENST00000641927 MAP4K5Q9Y4K4 846 aa16.5■□□□□ 0.23
PHGDH-230ENST00000641927 MEN1O00255 615 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 EBAG9O00559 213 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 PGRMC2O15173 223 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 CDC123O75794 336 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 STK17BO94768 372 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 KLK3P07288 261 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 ITGAXP20702 1163 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 AGXTP21549 392 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 DGKQP52824 942 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 GABREP78334 506 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 DCDP81605 110 aaKnown RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 MAPRE2Q15555 327 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 UGT8Q16880 541 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 NKAIN1Q4KMZ8 207 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 TIGD2Q4W5G0 525 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 SPANXN4Q5MJ08 99 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 CPTPQ5TA50 214 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 FAM180BQ6P0A1 224 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 POU5F2Q8N7G0 328 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 EXOSC8Q96B26 276 aaKnown RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
PHGDH-230ENST00000641927 PCDHA9Q9Y5H5 950 aa16.49■□□□□ 0.23
PHGDH-230ENST00000641927 CCDC154A6NI56 674 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 WASHC1A8K0Z3 465 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 CAPN14A8MX76 684 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 C9orf172C9J069 976 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 PIM1P11309 404 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-230ENST00000641927 S100A3P33764 101 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 RORAP35398 523 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 C21orf58P58505 322 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 CYLC2Q14093 348 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-230ENST00000641927 RCAN2Q14206 197 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 ERV3-1Q14264 604 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 BLOC1S3Q6QNY0 202 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 GALNT6Q8NCL4 622 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 ADAMTS18Q8TE60 1221 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 MR1Q95460 341 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 TESCQ96BS2 214 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 TBC1D20Q96BZ9 403 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 CMTM5Q96DZ9 223 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 SPDL1Q96EA4 605 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 POLR1BQ9H9Y6 1135 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 ATAD3AQ9NVI7 634 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 TMEM45AQ9NWC5 275 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 UTS2RQ9UKP6 389 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 MRPS33Q9Y291 106 aaKnown RBP16.48■□□□□ 0.23
PHGDH-230ENST00000641927 PCDHGA3Q9Y5H0 932 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 WDFY3Q8IZQ1 3526 aa16.48■□□□□ 0.23
PHGDH-230ENST00000641927 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 CYR61O00622 381 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 B4GALT2O60909 372 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 ERAL1O75616 437 aaKnown RBP16.47■□□□□ 0.23
PHGDH-230ENST00000641927 IL6P05231 212 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 LAMP1P11279 417 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 COX4I1P13073 169 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 KIR3DL1P43629 444 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 ZFP36L2P47974 494 aaKnown RBP16.47■□□□□ 0.23
PHGDH-230ENST00000641927 SRSF11Q05519 484 aaKnown RBP16.47■□□□□ 0.23
PHGDH-230ENST00000641927 DPY19L1Q2PZI1 675 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 VPS26BQ4G0F5 336 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 KLHL29Q96CT2 875 aa16.47■□□□□ 0.23
PHGDH-230ENST00000641927 MTERF3Q96E29 417 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms