RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 OR3A1P47881 315 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 CEACAM7Q14002 265 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 SHEQ5VZ18 495 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 TMEM64Q6YI46 380 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 KRT77Q7Z794 578 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF781Q8N8C0 355 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 Q8NFD4 153 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 SIPA1Q96FS4 1042 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 CNDP2Q96KP4 475 aaKnown RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 PRMT1Q99873 361 aaKnown RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 INPP5KQ9BT40 448 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 OR10A4Q9H209 315 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 PDFQ9HBH1 243 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 CFDP1Q9UEE9 299 aaPredicted RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 Q9UF83 564 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 A0A087WV48 116 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 OR5H15A6NDH6 313 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF724A8MTY0 619 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF487B1APH4 448 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 NEDD8-MDP1E9PL57 170 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 P2RX6O15547 441 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 FRAT2O75474 233 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-216ENST00000640058 FAM58BPP0C7Q3 252 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 HMGCLP35914 325 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 HLCSP50747 726 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 HMGCS2P54868 508 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 CETN1Q12798 172 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 ABRAXAS2Q15018 415 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 REP15Q6BDI9 236 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 GTSF1Q8WW33 167 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 PHYHIPLQ96FC7 376 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 FERMT1Q9BQL6 677 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 S100A14Q9HCY8 104 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 IL17CQ9P0M4 197 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 ITGA11Q9UKX5 1188 aa3.42□□□□□ -1.86
CCDC7-216ENST00000640058 A0A0B4J203 849 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 ZSCAN5CA6NGD5 496 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-216ENST00000640058 RPN1P04843 607 aaKnown RBP3.41□□□□□ -1.86
CCDC7-216ENST00000640058 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 ALDH3B1P43353 468 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 BRCC3P46736 316 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 NAGLUP54802 743 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 FOLH1Q04609 750 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 CAPRIN1Q14444 709 aaKnown RBP3.41□□□□□ -1.86
CCDC7-216ENST00000640058 PLPP4Q5VZY2 271 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 PAMR1Q6UXH9 720 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF730Q6ZMV8 503 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 CCDC71Q8IV32 467 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-216ENST00000640058 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 NKAIN3Q8N8D7 197 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 SEPT8Q92599 483 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 MINDY3Q9H8M7 445 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 ANAPC5Q9UJX4 755 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 TMED7Q9Y3B3 224 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 FAM205AQ6ZU69 1335 aa3.41□□□□□ -1.86
CCDC7-216ENST00000640058 COL16A1Q07092 1604 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-216ENST00000640058 KLF18A0A0U1RQI7 1052 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 ANKDD1BA6NHY2 528 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 FAM220BPB1ANY3 271 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 KRT6AP02538 564 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 KRT6BP04259 564 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 VIMP08670 466 aaKnown RBP3.4□□□□□ -1.87
CCDC7-216ENST00000640058 ACKR3P25106 362 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 KRT6CP48668 564 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 CAPZA1P52907 286 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 GPR50Q13585 617 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 TTC31Q49AM3 519 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-216ENST00000640058 SPOUT1Q5T280 376 aaKnown RBP3.4□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF776Q68DI1 518 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-216ENST00000640058 NLRP14Q86W24 1093 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 DZIP1Q86YF9 867 aaKnown RBP3.4□□□□□ -1.87
CCDC7-216ENST00000640058 SAP25Q8TEE9 199 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 INTS14Q96SY0 518 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 AP1M1Q9BXS5 423 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 EDEM3Q9BZQ6 932 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 PFDN4Q9NQP4 134 aa3.4□□□□□ -1.87
CCDC7-216ENST00000640058 ARHGEF37A1IGU5 675 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 C5orf52A6NGY3 159 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 H0Y9J4 135 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 SCO2O43819 266 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 SELENOFO60613 162 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 FASP25445 335 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 GJB2P29033 226 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF41P51814 821 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-216ENST00000640058 CDO1Q16878 200 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 LYPLAL1Q5VWZ2 237 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 PM20D1Q6GTS8 502 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ZNF600Q6ZNG1 722 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 VASH2Q86V25 355 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ANKRD46Q86W74 232 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 TIGD4Q8IY51 512 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 SLC22A18ASQ8N1D0 253 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 TMEM99Q8N816 258 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 SAMD12Q8N8I0 201 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 CLEC1AQ8NC01 280 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 C8orf46Q8TAG6 207 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 NUS1Q96E22 293 aa3.39□□□□□ -1.87
CCDC7-216ENST00000640058 ZMAT2Q96NC0 199 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms