RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ARID2Q68CP9 1835 aa5.69□□□□□ -1.5
RFC1-217ENST00000639695 IGHV4-61A0A0C4DH41 118 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 TRBV4-1A0A0J9YWV2 114 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 PLSCR5A0PG75 271 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 DENND3A2RUS2 1198 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 YJEFN3A6XGL0 299 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 TCP10L2B9ZVM9 353 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 KLF11O14901 512 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 ARPC1BO15143 372 aaKnown RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 MAPK13O15264 365 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 INSIG1O15503 277 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 MLNRO43193 412 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 MFN2O95140 757 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 IGHV4-59P01825 116 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 OPN1MWP04001 364 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 ATP1A1P05023 1023 aaKnown RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 OPN1MW2P0DN77 364 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 OPN1MW3P0DN78 364 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 EPB41P11171 864 aaKnown RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 CEACAM1P13688 526 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 AADACP22760 399 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 NLRP11P59045 1033 aaKnown RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 LRRC74AQ0VAA2 488 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 HSPA14Q0VDF9 509 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 DUSP5Q16690 384 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 AGKQ53H12 422 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 TMEM41BQ5BJD5 291 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 ATAD3BQ5T9A4 648 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 ARHGAP17Q68EM7 881 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 TMEM207Q6UWW9 146 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 NFE4Q86UQ8 179 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 NAGSQ8N159 534 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 BANPQ8N9N5 519 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 CCDC197Q8NCU1 140 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 GIPC3Q8TF64 312 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 CHPT1Q8WUD6 406 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 CD101Q93033 1021 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 PINX1Q96BK5 328 aaKnown RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 MED30Q96HR3 178 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 MAGED4Q96JG8 741 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 EGLN1Q9GZT9 426 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 COX16Q9P0S2 106 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 ZNF624Q9P2J8 865 aaPredicted RBP5.68□□□□□ -1.5
RFC1-217ENST00000639695 OR1A2Q9Y585 309 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 SELENOKQ9Y6D0 94 aa5.68□□□□□ -1.5
RFC1-217ENST00000639695 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 NKX6-3A6NJ46 265 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 PRAC2D3DTV9 90 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 CHADO15335 359 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 ECE2O60344 883 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 SAP30O75446 220 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 NGFRP08138 427 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 PRDX2P32119 198 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 GBX2P52951 348 aaPredicted RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 CDKL1Q00532 357 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 EXOSC7Q15024 291 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 ACCSLQ4AC99 568 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 NADK2Q4G0N4 442 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 C9orf50Q5SZB4 431 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 WBP2NLQ6ICG8 309 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 SULT1C3Q6IMI6 304 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 TRMT1LQ7Z2T5 733 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 C16orf82Q7Z2V1 217 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 ZDHHC17Q8IUH5 632 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 TMEM45BQ96B21 275 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 THOC3Q96J01 351 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 ZNF354BQ96LW1 612 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 C1QTNF4Q9BXJ3 329 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 DDX31Q9H8H2 851 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 S100A14Q9HCY8 104 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 INTS9Q9NV88 658 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 ATAD3AQ9NVI7 634 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 HPCAL4Q9UM19 191 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 MRPS7Q9Y2R9 242 aaKnown RBP5.67□□□□□ -1.5
RFC1-217ENST00000639695 SPATA31D1Q6ZQQ2 1576 aa5.67□□□□□ -1.5
RFC1-217ENST00000639695 FGD5Q6ZNL6 1462 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 A0A087WUV0 522 aaPredicted RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 SERINC4A6NH21 518 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 TLX2O43763 284 aaPredicted RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 PALMO75781 387 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 TSHBP01222 138 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 SNHG28P0DPA3 235 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 SLC2A2P11168 524 aaPredicted RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 PDHBP11177 359 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 GP9P14770 177 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 PAICSP22234 425 aaKnown RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 HNRNPA2B1P22626 353 aaKnown RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 TMOD1P28289 359 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 OR1D5P58170 312 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 ACTR1AP61163 376 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 MEF2DQ14814 521 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 OR1C1Q15619 314 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 ZKSCAN8Q15776 578 aaPredicted RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 ZNF74Q16587 644 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 CAPN13Q6MZZ7 669 aaPredicted RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 LRRC8BQ6P9F7 803 aa5.66□□□□□ -1.5
RFC1-217ENST00000639695 CWC27Q6UX04 472 aaKnown RBP5.66□□□□□ -1.5
RFC1-217ENST00000639695 FOXL2NBQ6ZUU3 175 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms