RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ALDH3B2P48448 385 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 CCR5P51681 352 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 CCR8P51685 355 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TUBA4AP68366 448 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 REEP5Q00765 189 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 FOXC1Q12948 553 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 DEPDC1Q5TB30 811 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 R3HCC1LQ7Z5L2 792 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 HSH2DQ96JZ2 352 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 SPASTQ9UBP0 616 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3DA0A087WVF3 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3IA0A087WXS9 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3EA0A087X179 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3KA0A087X1G2 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 A0A1B0GVT2 93 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3FA6NER0 549 aaPredicted RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 ANKDD1BA6NHY2 528 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TMEM229AB2RXF0 380 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3LB9A6J9 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 GCM2O75603 506 aaPredicted RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 DIRAS1O95057 198 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 IGHV4-34P06331 123 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3HP0C7X1 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 HOXB6P17509 224 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 PPIBP23284 216 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 LRRC74AQ0VAA2 488 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3GQ6DHY5 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3CQ6IPX1 549 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 FKBP9P1Q75LS8 142 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 PLD3Q8IV08 490 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TBC1D3Q8IZP1 549 aaPredicted RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 RDH12Q96NR8 316 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 SH3GL3Q99963 347 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 RBM4BQ9BQ04 359 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 SLC35A5Q9BS91 424 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 LHX9Q9NQ69 397 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TAAR2Q9P1P5 351 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
ATRIP-208ENST00000639561 MOSPD1Q9UJG1 213 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 PCNX2A6NKB5 2137 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 LAMA1P25391 3075 aa13.18□□□□□ -0.3
ATRIP-208ENST00000639561 A0A1W2PPC4 97 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 ETFAP13804 333 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 BSGP35613 385 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 NUDT1P36639 197 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CRATP43155 626 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 YAP1P46937 504 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 MYBPC3Q14896 1274 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 HLA-BQ31612 363 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 AP1ARQ63HQ0 302 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 ANGPTL8Q6UXH0 198 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 IKBIPQ70UQ0 350 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 EIF3MQ7L2H7 374 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 OR5AK3PQ8NH89 298 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 NMD3Q96D46 503 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CAMK1GQ96NX5 476 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 APOOQ9BUR5 198 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 FGF22Q9HCT0 170 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 RPS6KA6Q9UK32 745 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 H3BSA7 217 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 AHCYL1O43865 530 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 TNFRSF21O75509 655 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 SEMA3DO95025 777 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 BMP10O95393 424 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 ELK4P28324 431 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 PCGF2P35227 344 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
ATRIP-208ENST00000639561 RAB28P51157 221 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 C21orf59P57076 290 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CSNK1G2P78368 415 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 BNC1Q01954 994 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 IQCCQ4KMZ1 466 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 FAM20CQ8IXL6 584 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 OR2A1Q8NGT9 310 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 MTERF3Q96E29 417 aa13.17□□□□□ -0.3
ATRIP-208ENST00000639561 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms