RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 LRTM1Q9HBL6 345 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF304Q9HCX3 659 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TNFRSF12AQ9NP84 129 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 MYNNQ9NPC7 610 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 SLCO1B3Q9NPD5 702 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 MKKSQ9NPJ1 570 aaPredicted RBP6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ASCL3Q9NQ33 180 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 ADAM21Q9UKJ8 722 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 PADI2Q9Y2J8 665 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 KLHL20Q9Y2M5 609 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 MMACHCQ9Y4U1 282 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 TIMM22Q9Y584 194 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 B3GALT1Q9Y5Z6 326 aa6.36□□□□□ -1.39
UPF3B-205ENST00000636792 C1orf226A1L170 272 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM8BA6NDV4 472 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TMEM233B4DJY2 109 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 PSMD12O00232 456 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 SDHDO14521 159 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF195O14628 629 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FOXS1O43638 330 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 PCDH7O60245 1069 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KIAA0754O94854 1291 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KLHL18O94889 574 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 SLITRK5O94991 958 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TNFSF15O95150 251 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 IGHEP01854 428 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 EIF2S1P05198 315 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF888P0CJ79 500 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CCL4P13236 92 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 DRD2P14416 443 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ITIH1P19827 911 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FBLP22087 321 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ATP5A1P25705 553 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TLX1P31314 330 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 BSGP35613 385 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CCR10P46092 362 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 MAPK12P53778 367 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 MAPK10P53779 464 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CLNS1AP54105 237 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 HSD17B7P56937 341 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 STX1BP61266 288 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 GNGT1P63211 74 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KLC1Q07866 573 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KIAA0040Q15053 153 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 HKDC1Q2TB90 917 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TBC1D25Q3MII6 688 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 NKAIN1Q4KMZ8 207 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 DEFB134Q4QY38 66 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 C6orf136Q5SQH8 315 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 OR52E8Q6IFG1 317 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CYP20A1Q6UW02 462 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ATG14Q6ZNE5 492 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 QSOX2Q6ZRP7 698 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 Q6ZSR9 355 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TTLL10Q6ZVT0 673 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 R3HCC1LQ7Z5L2 792 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CAMKMTQ7Z624 323 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF595Q8IYB9 648 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 C1orf52Q8N6N3 182 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ACOT4Q8N9L9 421 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FNDC5Q8NAU1 212 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KCT2Q8NC54 265 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 GLB1L3Q8NCI6 653 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 AGR3Q8TD06 166 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TSPEARQ8WU66 669 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 MEGF10Q96KG7 1140 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 IP6K3Q96PC2 410 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 F2RL3Q96RI0 385 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KCNA7Q96RP8 456 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CTRCQ99895 268 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 PELOQ9BRX2 385 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 GPR87Q9BY21 358 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 MRPL1Q9BYD6 325 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 NUF2Q9BZD4 464 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 BRINP2Q9C0B6 783 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 EPN3Q9H201 632 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 RABEP2Q9H5N1 569 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 APMAPQ9HDC9 416 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 TCF7L2Q9NQB0 619 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 PRDM7Q9NQW5 492 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FARSBQ9NSD9 589 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FGFR1OP2Q9NVK5 253 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 ZNF282Q9UDV7 671 aaPredicted RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 KCND3Q9UK17 655 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 DAPP1Q9UN19 280 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 EIF3LQ9Y262 564 aaKnown RBP6.35□□□□□ -1.39
UPF3B-205ENST00000636792 NAALAD2Q9Y3Q0 740 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 RNF114Q9Y508 228 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 PCDHGA6Q9Y5G7 932 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 FRYLO94915 3013 aa6.35□□□□□ -1.39
UPF3B-205ENST00000636792 CACNA1AO00555 2505 aa6.34□□□□□ -1.39
UPF3B-205ENST00000636792 SCN3AQ9NY46 2000 aa6.34□□□□□ -1.39
UPF3B-205ENST00000636792 A0A1W2PNU3 283 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-205ENST00000636792 A0A1W2PQ72 361 aa6.34□□□□□ -1.39
UPF3B-205ENST00000636792 CLDN4O14493 209 aa6.34□□□□□ -1.39
UPF3B-205ENST00000636792 CASC3O15234 703 aaKnown RBP6.34□□□□□ -1.39
UPF3B-205ENST00000636792 HCRTR1O43613 425 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms